RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 ARHGAP44Q17R89 818 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 SGSM1Q2NKQ1 1148 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 TSR1Q2NL82 804 aaKnown RBP12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 ZNF699Q32M78 642 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 ENOSF1Q7L5Y1 443 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 RNF169Q8NCN4 708 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 BEST2Q8NFU1 509 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 SHC3Q92529 594 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 TAF4BQ92750 862 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 TRIM43Q96BQ3 446 aaPredicted RBP12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 PGBD4Q96DM1 585 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 VWCEQ96DN2 955 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 CHP1Q99653 195 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 RSAD1Q9HA92 442 aa12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 ZNHIT6Q9NWK9 470 aaKnown RBP12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 TDRD15B5MCY1 1934 aaKnown RBP12.99□□□□□ -0.33
TRIM49B-201ENST00000332682 INPPL1O15357 1258 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 ARHGAP6O43182 974 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 XPOTO43592 962 aaKnown RBP12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 IBSPP21815 317 aaPredicted RBP12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 ITGB8P26012 769 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 SOX5P35711 763 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 STAT1P42224 750 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 RBP5P82980 135 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 CUL2Q13617 745 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 ASIC2Q16515 512 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 HGSNATQ68CP4 663 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 CYP26C1Q6V0L0 522 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 DEFB128Q7Z7B8 93 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 TMTC1Q8IUR5 882 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 FAM81BQ96LP2 452 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 RPS6KC1Q96S38 1066 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 NIF3L1Q9GZT8 377 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 VRTNQ9H8Y1 702 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 UBN1Q9NPG3 1134 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 PRDM5Q9NQX1 630 aaPredicted RBP12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 ARHGAP20Q9P2F6 1191 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 AGAP1Q9UPQ3 857 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 TTC3P53804 2025 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 LTBP2Q14767 1821 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 ANO9A1A5B4 782 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 FOXN3O00409 490 aaPredicted RBP12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 ENPP3O14638 875 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 PPEF2O14830 753 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 GFPT2O94808 682 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 CLSTN1O94985 981 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 STAU1O95793 577 aaKnown RBP12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 EOMESO95936 686 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 TIMP1P01033 207 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 PLEKP08567 350 aaPredicted RBP12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 CYP3A5P20815 502 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 TBXAS1P24557 533 aaPredicted RBP12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 ATICP31939 592 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 RFC2P35250 354 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 ASPAP45381 313 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 SCNN1GP51170 649 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 ARID5AQ03989 594 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 MTF1Q14872 753 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 NAB2Q15742 525 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 C9orf57Q5W0N0 161 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 RAD9BQ6WBX8 426 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 IRF2BP2Q7Z5L9 587 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 ZSCAN30Q86W11 494 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 GOLGA2P5Q9HBQ8 144 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 SLC38A7Q9NVC3 462 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 MIOSQ9NXC5 875 aa12.98□□□□□ -0.33
TRIM49B-201ENST00000332682 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 EVI5O60447 810 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 OFD1O75665 1012 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 SERPING1P05155 500 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 THP07101 528 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 FERP16591 822 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 ACO1P21399 889 aaKnown RBP12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 LRPAP1P30533 357 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 PRKCIP41743 596 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 KCNJ6P48051 423 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 WDR72Q3MJ13 1102 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 ZNF667Q5HYK9 610 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 CLLU1OSQ5K130 101 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 FMNL3Q8IVF7 1028 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 FAM71AQ8IYT1 594 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 LRRC52Q8N7C0 313 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 UBR7Q8N806 425 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 JAKMIP2Q96AA8 810 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 HPDLQ96IR7 371 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 FAXDC2Q96IV6 333 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 ELAC1Q9H777 363 aaKnown RBP12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 TMEM161AQ9NX61 479 aa12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 R3HCC1Q9Y3T6 440 aaKnown RBP12.97□□□□□ -0.33
TRIM49B-201ENST00000332682 PIRO00625 290 aa12.96□□□□□ -0.33
TRIM49B-201ENST00000332682 FGFR1P11362 822 aa12.96□□□□□ -0.33
TRIM49B-201ENST00000332682 RAG1P15918 1043 aa12.96□□□□□ -0.33
TRIM49B-201ENST00000332682 KLHL30Q0D2K2 578 aa12.96□□□□□ -0.33
TRIM49B-201ENST00000332682 GRIK3Q13003 919 aa12.96□□□□□ -0.33
TRIM49B-201ENST00000332682 TDRD12Q587J7 1177 aaKnown RBP12.96□□□□□ -0.33
TRIM49B-201ENST00000332682 CNKSR3Q6P9H4 555 aa12.96□□□□□ -0.33
TRIM49B-201ENST00000332682 GLB1LQ6UWU2 654 aa12.96□□□□□ -0.33
TRIM49B-201ENST00000332682 SCARA5Q6ZMJ2 495 aa12.96□□□□□ -0.33
TRIM49B-201ENST00000332682 CRIPAKQ8N1N5 446 aa12.96□□□□□ -0.33
TRIM49B-201ENST00000332682 KIAA1524Q8TCG1 905 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms