RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 SLC1A5Q15758 541 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 TMEM63BQ5T3F8 832 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 EGFL6Q8IUX8 553 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 REPIN1Q9BWE0 567 aaKnown RBP8.37□□□□□ -1.07
VMA21-201ENST00000330374 LRRC4BQ9NT99 713 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 NARFQ9UHQ1 456 aa8.37□□□□□ -1.07
VMA21-201ENST00000330374 IRS2Q9Y4H2 1338 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 KRT36O76013 467 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 HLA-DOAP06340 250 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 ATF7P17544 494 aaPredicted RBP8.36□□□□□ -1.07
VMA21-201ENST00000330374 GNAZP19086 355 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 MAGEA4P43358 317 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 NOP14P78316 857 aaKnown RBP8.36□□□□□ -1.07
VMA21-201ENST00000330374 FMO1Q01740 532 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 DSTYKQ6XUX3 929 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 SLF2Q8IX21 1173 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 AGGF1Q8N302 714 aaeCLIP8.36□□□□□ -1.07
VMA21-201ENST00000330374 GLIS1Q8NBF1 620 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 LMO3Q8TAP4 145 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 ACSF2Q96CM8 615 aaPredicted RBP8.36□□□□□ -1.07
VMA21-201ENST00000330374 KREMEN1Q96MU8 473 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 SMC6Q96SB8 1091 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 PLVAPQ9BX97 442 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 SMCHD1A6NHR9 2005 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 UBTFL6P0CB48 400 aaPredicted RBP8.36□□□□□ -1.07
VMA21-201ENST00000330374 T-ENOLP0DO92 83 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 KRT10P13645 584 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 PIK3CAP42336 1068 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 PLCB3Q01970 1234 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 SPARCL1Q14515 664 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 STXBP4Q6ZWJ1 553 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 CD101Q93033 1021 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 SLC7A6OSQ96CW6 309 aaPredicted RBP8.36□□□□□ -1.07
VMA21-201ENST00000330374 LRMDAQ9H2I8 198 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 LRRC19Q9H756 370 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 POLLQ9UGP5 575 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 KAT6AQ92794 2004 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 NVLO15381 856 aaKnown RBP8.36□□□□□ -1.07
VMA21-201ENST00000330374 ATP6V1C1P21283 382 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 NT5C2P49902 561 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 CDR2Q01850 454 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 GABPAQ06546 454 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 MDH1BQ5I0G3 518 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 LMBRD2Q68DH5 695 aaPredicted RBP8.36□□□□□ -1.07
VMA21-201ENST00000330374 LVRNQ6Q4G3 990 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 NLRP9Q7RTR0 991 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 RNF135Q8IUD6 432 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 PLEKHO2Q8TD55 490 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 FAM20AQ96MK3 541 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 WDR18Q9BV38 432 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 NMRK1Q9NWW6 199 aa8.36□□□□□ -1.07
VMA21-201ENST00000330374 DOT1LQ8TEK3 1739 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 CYP3A7-CYP3A51PA0A087WV96 503 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 A0A1B0GVG6 124 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 EIF3DO15371 548 aaKnown RBP eCLIP8.35□□□□□ -1.07
VMA21-201ENST00000330374 ZBED4O75132 1171 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 CYP3A7P24462 503 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 IVDP26440 423 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 PSMC4P43686 418 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 ZYXQ15942 572 aaKnown RBP8.35□□□□□ -1.07
VMA21-201ENST00000330374 CYP1B1Q16678 543 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 PCNX4Q63HM2 1172 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 VPS52Q8N1B4 723 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 SEMA4DQ92854 862 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 MCUR1Q96AQ8 359 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 DCLK3Q9C098 648 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 C10orf88Q9H8K7 445 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 KIAA1586Q9HCI6 787 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 ZNF148Q9UQR1 794 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 ZCCHC18P0CG32 403 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 CYP11B1P15538 503 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 KPNB1Q14974 876 aaKnown RBP8.35□□□□□ -1.07
VMA21-201ENST00000330374 C11orf91Q3C1V1 193 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 ATP13A4Q4VNC1 1196 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 SYCP2LQ5T4T6 812 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 RHBDF2Q6PJF5 856 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 CBWD2Q8IUF1 395 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 ZBED8Q8IZ13 594 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 PHC3Q8NDX5 983 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 PSPC1Q8WXF1 523 aaKnown RBP8.35□□□□□ -1.07
VMA21-201ENST00000330374 PRR11Q96HE9 360 aaPredicted RBP8.35□□□□□ -1.07
VMA21-201ENST00000330374 KIFC3Q9BVG8 833 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 FHDC1Q9C0D6 1143 aaPredicted RBP8.35□□□□□ -1.07
VMA21-201ENST00000330374 NEUROD4Q9HD90 331 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 GPRC5CQ9NQ84 441 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 ARFGEF1Q9Y6D6 1849 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 IGKV6D-41A0A0C4DH26 115 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 F5H6K3 240 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 DCTN3O75935 186 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 FGFR1P11362 822 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 RASSF2P50749 326 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 ICA1Q05084 483 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 AP3B2Q13367 1082 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 SNX30Q5VWJ9 437 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 OTOAQ7RTW8 1153 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 ATL2Q8NHH9 583 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 RFWD2Q8NHY2 731 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 LXNQ9BS40 222 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 TRIM4Q9C037 500 aa8.35□□□□□ -1.07
VMA21-201ENST00000330374 NOCTQ9UK39 431 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms