RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 MSH4O15457 936 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 RNF40O75150 1001 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 CDC45O75419 566 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 APBB3O95704 486 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 EPHA5P54756 1037 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 PTH1RQ03431 593 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 LRCH2Q5VUJ6 765 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 FSTL4Q6MZW2 842 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 ANKS3Q6ZW76 656 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 FANCBQ8NB91 859 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 PIGKQ92643 395 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 DDX27Q96GQ7 796 aaKnown RBP16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 MTA3Q9BTC8 594 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 TEKT3Q9BXF9 490 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 ASAH2Q9NR71 780 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 BARHL2Q9NY43 387 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 INVSQ9Y283 1065 aa16.37■□□□□ 0.21
CTHRC1-201ENST00000330295 SH2B2O14492 632 aaPredicted RBP16.36■□□□□ 0.21
CTHRC1-201ENST00000330295 SEC24AO95486 1093 aa16.36■□□□□ 0.21
CTHRC1-201ENST00000330295 ATF2P15336 505 aa16.36■□□□□ 0.21
CTHRC1-201ENST00000330295 ENGP17813 658 aa16.36■□□□□ 0.21
CTHRC1-201ENST00000330295 TNK2Q07912 1038 aa16.36■□□□□ 0.21
CTHRC1-201ENST00000330295 GRSF1Q12849 480 aaKnown RBP eCLIP16.36■□□□□ 0.21
CTHRC1-201ENST00000330295 RNF20Q5VTR2 975 aa16.36■□□□□ 0.21
CTHRC1-201ENST00000330295 SLC8B1Q6J4K2 584 aa16.36■□□□□ 0.21
CTHRC1-201ENST00000330295 ZNF843Q8N446 348 aa16.36■□□□□ 0.21
CTHRC1-201ENST00000330295 SHKBP1Q8TBC3 707 aa16.36■□□□□ 0.21
CTHRC1-201ENST00000330295 ADAMTS14Q8WXS8 1223 aa16.36■□□□□ 0.21
CTHRC1-201ENST00000330295 SLC5A5Q92911 643 aa16.36■□□□□ 0.21
CTHRC1-201ENST00000330295 ZNF512Q96ME7 567 aaPredicted RBP16.36■□□□□ 0.21
CTHRC1-201ENST00000330295 LRRC3BQ96PB8 259 aa16.36■□□□□ 0.21
CTHRC1-201ENST00000330295 ANO2Q9NQ90 1003 aa16.36■□□□□ 0.21
CTHRC1-201ENST00000330295 RBM8AQ9Y5S9 174 aaKnown RBP16.36■□□□□ 0.21
CTHRC1-201ENST00000330295 PTGESO14684 152 aa16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 ASAP2O43150 1006 aa16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 ARHGAP6O43182 974 aa16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 PRC1O43663 620 aa16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 NPTXRO95502 500 aa16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 THP07101 528 aa16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 ARF4P18085 180 aaPredicted RBP16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 TKTP29401 623 aaKnown RBP16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 DHPSP49366 369 aaPredicted RBP16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 DGKEP52429 567 aa16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 NPEPPSP55786 919 aa16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 HNRNPDQ14103 355 aaKnown RBP16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 FERMT3Q86UX7 667 aa16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 GPIHBP1Q8IV16 184 aa16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 ARID3BQ8IVW6 561 aaPredicted RBP16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 HDDC3Q8N4P3 179 aa16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 GJA10Q969M2 543 aa16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 DHX33Q9H6R0 707 aaKnown RBP16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 CEP72Q9P209 647 aa16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 DKK4Q9UBT3 224 aa16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 SLC12A7Q9Y666 1083 aa16.35■□□□□ 0.21
CTHRC1-201ENST00000330295 A0A087WV48 116 aa16.34■□□□□ 0.21
CTHRC1-201ENST00000330295 INO80B-WBP1J3KQ70 363 aa16.34■□□□□ 0.21
CTHRC1-201ENST00000330295 ADAMTS3O15072 1205 aa16.34■□□□□ 0.21
CTHRC1-201ENST00000330295 IGFBP6P24592 240 aaPredicted RBP16.34■□□□□ 0.21
CTHRC1-201ENST00000330295 PTENP60484 403 aa16.34■□□□□ 0.21
CTHRC1-201ENST00000330295 PLCB2Q00722 1185 aa16.34■□□□□ 0.21
CTHRC1-201ENST00000330295 NAB2Q15742 525 aa16.34■□□□□ 0.21
CTHRC1-201ENST00000330295 AMHR2Q16671 573 aa16.34■□□□□ 0.21
CTHRC1-201ENST00000330295 ITPRIPL2Q3MIP1 535 aa16.34■□□□□ 0.21
CTHRC1-201ENST00000330295 USP39Q53GS9 565 aaKnown RBP16.34■□□□□ 0.21
CTHRC1-201ENST00000330295 SLC27A1Q6PCB7 646 aa16.34■□□□□ 0.21
CTHRC1-201ENST00000330295 SYT13Q7L8C5 426 aa16.34■□□□□ 0.21
CTHRC1-201ENST00000330295 CDR2LQ86X02 465 aaPredicted RBP16.34■□□□□ 0.21
CTHRC1-201ENST00000330295 MICU3Q86XE3 530 aa16.34■□□□□ 0.21
CTHRC1-201ENST00000330295 EXOC8Q8IYI6 725 aa16.34■□□□□ 0.21
CTHRC1-201ENST00000330295 GON4LQ3T8J9 2241 aa16.34■□□□□ 0.21
CTHRC1-201ENST00000330295 TMEM189-UBE2V1I3L0A0 370 aa16.33■□□□□ 0.2
CTHRC1-201ENST00000330295 DPYSL4O14531 572 aa16.33■□□□□ 0.2
CTHRC1-201ENST00000330295 PSMD10O75832 226 aa16.33■□□□□ 0.2
CTHRC1-201ENST00000330295 EGFP01133 1207 aa16.33■□□□□ 0.2
CTHRC1-201ENST00000330295 PRKCBP05771 671 aa16.33■□□□□ 0.2
CTHRC1-201ENST00000330295 BCKDHBP21953 392 aa16.33■□□□□ 0.2
CTHRC1-201ENST00000330295 LIFRP42702 1097 aa16.33■□□□□ 0.2
CTHRC1-201ENST00000330295 PTPAQ15257 358 aa16.33■□□□□ 0.2
CTHRC1-201ENST00000330295 ZNF579Q8NAF0 562 aaKnown RBP16.33■□□□□ 0.2
CTHRC1-201ENST00000330295 LSM14AQ8ND56 463 aaKnown RBP16.33■□□□□ 0.2
CTHRC1-201ENST00000330295 TCP11Q8WWU5 503 aa16.33■□□□□ 0.2
CTHRC1-201ENST00000330295 TMEM87BQ96K49 555 aa16.33■□□□□ 0.2
CTHRC1-201ENST00000330295 BMP2KQ9NSY1 1161 aaPredicted RBP16.33■□□□□ 0.2
CTHRC1-201ENST00000330295 MBD1Q9UIS9 605 aaPredicted RBP16.33■□□□□ 0.2
CTHRC1-201ENST00000330295 V9GY48 417 aaPredicted RBP16.33■□□□□ 0.2
CTHRC1-201ENST00000330295 NUP210Q8TEM1 1887 aaPredicted RBP16.33■□□□□ 0.2
CTHRC1-201ENST00000330295 TRDMT1O14717 391 aaKnown RBP16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 B3GAT3O94766 335 aa16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 RFC5P40937 340 aa16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 ARPP19P56211 112 aa16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 PSMC5P62195 406 aa16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 MBTD1Q05BQ5 628 aa16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 TWF1Q12792 350 aa16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 DMC1Q14565 340 aa16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 B3GNT9Q6UX72 402 aa16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 SKAP1Q86WV1 359 aa16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 SCUBE3Q8IX30 993 aa16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 REXO1Q8N1G1 1221 aaKnown RBP16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 USP9XQ93008 2570 aaPredicted RBP16.32■□□□□ 0.2
CTHRC1-201ENST00000330295 CEP170P1Q96L14 293 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms