RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CAPZA3Q96KX2 299 aa21.72■■□□□ 1.07
RIPPLY3-201ENST00000329553 IMPG2Q9BZV3 1241 aa21.72■■□□□ 1.07
RIPPLY3-201ENST00000329553 PGK1P00558 417 aa21.72■■□□□ 1.07
RIPPLY3-201ENST00000329553 TBXAS1P24557 533 aaPredicted RBP21.72■■□□□ 1.07
RIPPLY3-201ENST00000329553 HOXA11P31270 313 aaPredicted RBP21.72■■□□□ 1.07
RIPPLY3-201ENST00000329553 IFI16Q16666 785 aaKnown RBP21.72■■□□□ 1.07
RIPPLY3-201ENST00000329553 SLC10A6Q3KNW5 377 aa21.72■■□□□ 1.07
RIPPLY3-201ENST00000329553 ARHGEF26Q96DR7 871 aa21.72■■□□□ 1.07
RIPPLY3-201ENST00000329553 ANKRD36BP1Q96IX9 119 aa21.72■■□□□ 1.07
RIPPLY3-201ENST00000329553 C17orf102A2RUQ5 167 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 RTN2O75298 545 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 TNNC2P02585 160 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 NFICP08651 508 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 GZMAP12544 262 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 CACNB2Q08289 660 aaPredicted RBP21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 TRPC3Q13507 836 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 SGSM1Q2NKQ1 1148 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 C7orf31Q8N865 590 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 LRRC57Q8N9N7 239 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 SLC35G2Q8TBE7 412 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 COG1Q8WTW3 980 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 OSBPL9Q96SU4 736 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 PSMB7Q99436 277 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 VIPAS39Q9H9C1 493 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 OSGEPQ9NPF4 335 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 RNF186Q9NXI6 227 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 PCDHB4Q9Y5E5 795 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 DARSP14868 501 aaKnown RBP21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 HOXC8P31273 242 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 POU5F1Q01860 360 aaKnown RBP21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 MEI1Q5TIA1 1274 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 JADE1Q6IE81 842 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 CATSPER4Q7RTX7 472 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 TMEM130Q8N3G9 435 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 ADPGKQ9BRR6 497 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 GOLPH3Q9H4A6 298 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 VPS18Q9P253 973 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 HYOU1Q9Y4L1 999 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 PCDHB2Q9Y5E7 798 aa21.71■■□□□ 1.07
RIPPLY3-201ENST00000329553 NCANO14594 1321 aa21.7■■□□□ 1.06
RIPPLY3-201ENST00000329553 PDE2AO00408 941 aaPredicted RBP21.7■■□□□ 1.06
RIPPLY3-201ENST00000329553 SEPT4O43236 478 aa21.7■■□□□ 1.06
RIPPLY3-201ENST00000329553 CXCR5P32302 372 aa21.7■■□□□ 1.06
RIPPLY3-201ENST00000329553 TMEM270Q6UE05 265 aa21.7■■□□□ 1.06
RIPPLY3-201ENST00000329553 RFFLQ8WZ73 363 aa21.7■■□□□ 1.06
RIPPLY3-201ENST00000329553 PACSIN2Q9UNF0 486 aaPredicted RBP21.7■■□□□ 1.06
RIPPLY3-201ENST00000329553 CNTN6Q9UQ52 1028 aa21.7■■□□□ 1.06
RIPPLY3-201ENST00000329553 KPNA6O60684 536 aa21.7■■□□□ 1.06
RIPPLY3-201ENST00000329553 KYAT1Q16773 422 aa21.7■■□□□ 1.06
RIPPLY3-201ENST00000329553 CXCL17Q6UXB2 119 aa21.7■■□□□ 1.06
RIPPLY3-201ENST00000329553 CREG2Q8IUH2 290 aa21.7■■□□□ 1.06
RIPPLY3-201ENST00000329553 FAM71BQ8TC56 605 aa21.7■■□□□ 1.06
RIPPLY3-201ENST00000329553 ACAP3Q96P50 834 aa21.7■■□□□ 1.06
RIPPLY3-201ENST00000329553 XYLT2Q9H1B5 865 aa21.7■■□□□ 1.06
RIPPLY3-201ENST00000329553 TCP1P17987 556 aaKnown RBP21.69■■□□□ 1.06
RIPPLY3-201ENST00000329553 EIF4BP23588 611 aaKnown RBP21.69■■□□□ 1.06
RIPPLY3-201ENST00000329553 BPIFB4P59827 614 aa21.69■■□□□ 1.06
RIPPLY3-201ENST00000329553 MAP9Q49MG5 647 aa21.69■■□□□ 1.06
RIPPLY3-201ENST00000329553 REM2Q8IYK8 340 aaPredicted RBP21.69■■□□□ 1.06
RIPPLY3-201ENST00000329553 TMEM40Q8WWA1 233 aa21.69■■□□□ 1.06
RIPPLY3-201ENST00000329553 MTG1Q9BT17 334 aaPredicted RBP21.69■■□□□ 1.06
RIPPLY3-201ENST00000329553 UPF3AQ9H1J1 476 aaKnown RBP21.69■■□□□ 1.06
RIPPLY3-201ENST00000329553 ACBD3Q9H3P7 528 aa21.69■■□□□ 1.06
RIPPLY3-201ENST00000329553 ASB7Q9H672 318 aa21.69■■□□□ 1.06
RIPPLY3-201ENST00000329553 MED4Q9NPJ6 270 aa21.69■■□□□ 1.06
RIPPLY3-201ENST00000329553 SIX4Q9UIU6 781 aa21.69■■□□□ 1.06
RIPPLY3-201ENST00000329553 TSKSQ9UJT2 592 aa21.69■■□□□ 1.06
RIPPLY3-201ENST00000329553 GNAT1P11488 350 aa21.68■■□□□ 1.06
RIPPLY3-201ENST00000329553 ELNP15502 786 aa21.68■■□□□ 1.06
RIPPLY3-201ENST00000329553 ZNF572Q7Z3I7 529 aaPredicted RBP21.68■■□□□ 1.06
RIPPLY3-201ENST00000329553 UBR7Q8N806 425 aa21.68■■□□□ 1.06
RIPPLY3-201ENST00000329553 C1orf127Q8N9H9 656 aa21.68■■□□□ 1.06
RIPPLY3-201ENST00000329553 CREBZFQ9NS37 354 aa21.68■■□□□ 1.06
RIPPLY3-201ENST00000329553 NPTXRO95502 500 aa21.68■■□□□ 1.06
RIPPLY3-201ENST00000329553 RARBP10826 455 aa21.68■■□□□ 1.06
RIPPLY3-201ENST00000329553 GPC5P78333 572 aa21.68■■□□□ 1.06
RIPPLY3-201ENST00000329553 ZNF699Q32M78 642 aa21.68■■□□□ 1.06
RIPPLY3-201ENST00000329553 SLFN11Q7Z7L1 901 aa21.68■■□□□ 1.06
RIPPLY3-201ENST00000329553 NIF3L1Q9GZT8 377 aa21.68■■□□□ 1.06
RIPPLY3-201ENST00000329553 RNF216Q9NWF9 866 aaPredicted RBP21.68■■□□□ 1.06
RIPPLY3-201ENST00000329553 COG5Q9UP83 839 aa21.68■■□□□ 1.06
RIPPLY3-201ENST00000329553 FAN1Q9Y2M0 1017 aa21.68■■□□□ 1.06
RIPPLY3-201ENST00000329553 MROH7Q68CQ1 1323 aa21.68■■□□□ 1.06
RIPPLY3-201ENST00000329553 TRPA1O75762 1119 aa21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 KRT19P08727 400 aa21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 CCND3P30281 292 aaPredicted RBP21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 GRM5P41594 1212 aa21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 AARSP49588 968 aaKnown RBP eCLIP21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 SNX17Q15036 470 aa21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 RBBP8NLQ8NC74 664 aaPredicted RBP21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 CAGE1Q8TC20 777 aa21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 SPC25Q9HBM1 224 aa21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 LMAN1P49257 510 aa21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 DNA2P51530 1060 aa21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 ITIH3Q06033 890 aa21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 NBPF20Q3BBV1 942 aa21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 DCAF4L1Q3SXM0 396 aa21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 HSP90B2PQ58FF3 399 aa21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 ACAD10Q6JQN1 1059 aa21.67■■□□□ 1.06
RIPPLY3-201ENST00000329553 SLC27A1Q6PCB7 646 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms