RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 SNW1Q13573 536 aaKnown RBP16.06■□□□□ 0.16
CLRN1-203ENST00000328863 ZBTB6Q15916 424 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 TAS1R1Q7RTX1 841 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 EFCAB13Q8IY85 973 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 XXYLT1Q8NBI6 393 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 ENGASEQ8NFI3 743 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.06■□□□□ 0.16
CLRN1-203ENST00000328863 ADAMTS19Q8TE59 1207 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 SUSD3Q96L08 255 aa16.06■□□□□ 0.16
CLRN1-203ENST00000328863 TULP1O00294 542 aaPredicted RBP16.05■□□□□ 0.16
CLRN1-203ENST00000328863 TGFB1I1O43294 461 aa16.05■□□□□ 0.16
CLRN1-203ENST00000328863 MBTPS2O43462 519 aa16.05■□□□□ 0.16
CLRN1-203ENST00000328863 TMEM191BP0C7N4 346 aa16.05■□□□□ 0.16
CLRN1-203ENST00000328863 IL9P15248 144 aa16.05■□□□□ 0.16
CLRN1-203ENST00000328863 EPCAMP16422 314 aa16.05■□□□□ 0.16
CLRN1-203ENST00000328863 TKTP29401 623 aaKnown RBP16.05■□□□□ 0.16
CLRN1-203ENST00000328863 UBE2HP62256 183 aa16.05■□□□□ 0.16
CLRN1-203ENST00000328863 RBM10P98175 930 aaKnown RBP16.05■□□□□ 0.16
CLRN1-203ENST00000328863 TFAMQ00059 246 aaKnown RBP16.05■□□□□ 0.16
CLRN1-203ENST00000328863 PNOCQ13519 176 aa16.05■□□□□ 0.16
CLRN1-203ENST00000328863 SNRNP35Q16560 246 aaKnown RBP16.05■□□□□ 0.16
CLRN1-203ENST00000328863 ZNF280DQ6N043 979 aa16.05■□□□□ 0.16
CLRN1-203ENST00000328863 PRSS55Q6UWB4 352 aaPredicted RBP16.05■□□□□ 0.16
CLRN1-203ENST00000328863 PIAS4Q8N2W9 510 aaPredicted RBP16.05■□□□□ 0.16
CLRN1-203ENST00000328863 APPL2Q8NEU8 664 aa16.05■□□□□ 0.16
CLRN1-203ENST00000328863 CACTINQ8WUQ7 758 aaKnown RBP16.05■□□□□ 0.16
CLRN1-203ENST00000328863 SMARCE1Q969G3 411 aa16.05■□□□□ 0.16
CLRN1-203ENST00000328863 FBXL18Q96ME1 805 aa16.05■□□□□ 0.16
CLRN1-203ENST00000328863 UHRF1Q96T88 793 aaPredicted RBP16.05■□□□□ 0.16
CLRN1-203ENST00000328863 GTPBP4Q9BZE4 634 aaKnown RBP16.05■□□□□ 0.16
CLRN1-203ENST00000328863 MAN1C1Q9NR34 630 aa16.05■□□□□ 0.16
CLRN1-203ENST00000328863 MTRRQ9UBK8 725 aa16.05■□□□□ 0.16
CLRN1-203ENST00000328863 SCN1AP35498 2009 aa16.05■□□□□ 0.16
CLRN1-203ENST00000328863 C2orf16Q68DN1 1984 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 GRXCR2A6NFK2 248 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 I3L4J1 428 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 CLIC2O15247 247 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 CALUO43852 315 aaPredicted RBP16.04■□□□□ 0.16
CLRN1-203ENST00000328863 EXOC3O60645 756 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 C1RP00736 705 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 PNPLA4P41247 253 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 GUCY2FP51841 1108 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 VARS2Q5ST30 1063 aaKnown RBP16.04■□□□□ 0.16
CLRN1-203ENST00000328863 C9orf57Q5W0N0 161 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 CES5AQ6NT32 575 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 CBWD2Q8IUF1 395 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 GLYCTKQ8IVS8 523 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 LNX1Q8TBB1 728 aaPredicted RBP16.04■□□□□ 0.16
CLRN1-203ENST00000328863 SLC22A17Q8WUG5 538 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 ANKRD36BP1Q96IX9 119 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 IPO9Q96P70 1041 aaKnown RBP16.04■□□□□ 0.16
CLRN1-203ENST00000328863 GSDMAQ96QA5 445 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 FNBP1Q96RU3 617 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 POP1Q99575 1024 aaKnown RBP16.04■□□□□ 0.16
CLRN1-203ENST00000328863 DPP3Q9NY33 737 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 PCDHB8Q9UN66 801 aa16.04■□□□□ 0.16
CLRN1-203ENST00000328863 R3HCC1Q9Y3T6 440 aaKnown RBP16.04■□□□□ 0.16
CLRN1-203ENST00000328863 H7C4K7 107 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 PDXKO00764 312 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 PRPF40AO75400 957 aaKnown RBP16.03■□□□□ 0.16
CLRN1-203ENST00000328863 TNNC2P02585 160 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 ODC1P11926 461 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 BMP1P13497 986 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 RPL17P18621 184 aaKnown RBP16.03■□□□□ 0.16
CLRN1-203ENST00000328863 AARSP49588 968 aaKnown RBP eCLIP16.03■□□□□ 0.16
CLRN1-203ENST00000328863 TAF6P49848 677 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 ITIH3Q06033 890 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 SMAD2Q15796 467 aaKnown RBP16.03■□□□□ 0.16
CLRN1-203ENST00000328863 SV2CQ496J9 727 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 LIN9Q5TKA1 542 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 CD300LGQ6UXG3 332 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 DSTYKQ6XUX3 929 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 WDR49Q8IV35 697 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 ELOA2Q8IYF1 753 aaPredicted RBP16.03■□□□□ 0.16
CLRN1-203ENST00000328863 GUF1Q8N442 669 aaKnown RBP16.03■□□□□ 0.16
CLRN1-203ENST00000328863 ZSWIM2Q8NEG5 633 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 NECTIN4Q96NY8 510 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 GBP4Q96PP9 640 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 MTMR12Q9C0I1 747 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 KCTD10Q9H3F6 313 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 PRKAG3Q9UGI9 489 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 ITGA11Q9UKX5 1188 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 USP15Q9Y4E8 981 aaPredicted RBP16.03■□□□□ 0.16
CLRN1-203ENST00000328863 BACE2Q9Y5Z0 518 aa16.03■□□□□ 0.16
CLRN1-203ENST00000328863 ANO9A1A5B4 782 aa16.02■□□□□ 0.16
CLRN1-203ENST00000328863 M0QZQ0 153 aa16.02■□□□□ 0.16
CLRN1-203ENST00000328863 GADD45BO75293 160 aaPredicted RBP16.02■□□□□ 0.16
CLRN1-203ENST00000328863 NR3C1P04150 777 aa16.02■□□□□ 0.16
CLRN1-203ENST00000328863 YWHAHQ04917 246 aaPredicted RBP16.02■□□□□ 0.16
CLRN1-203ENST00000328863 SYCE2Q6PIF2 218 aa16.02■□□□□ 0.16
CLRN1-203ENST00000328863 USP37Q86T82 979 aa16.02■□□□□ 0.16
CLRN1-203ENST00000328863 HDAC7Q8WUI4 952 aa16.02■□□□□ 0.16
CLRN1-203ENST00000328863 OXCT2Q9BYC2 517 aaPredicted RBP16.02■□□□□ 0.16
CLRN1-203ENST00000328863 PLEKHA4Q9H4M7 779 aa16.02■□□□□ 0.16
CLRN1-203ENST00000328863 PDE11AQ9HCR9 933 aa16.02■□□□□ 0.16
CLRN1-203ENST00000328863 FBXW11Q9UKB1 542 aa16.02■□□□□ 0.16
CLRN1-203ENST00000328863 CDY1Q9Y6F8 540 aa16.02■□□□□ 0.16
CLRN1-203ENST00000328863 PIRO00625 290 aa16.01■□□□□ 0.15
CLRN1-203ENST00000328863 PPEF2O14830 753 aa16.01■□□□□ 0.15
CLRN1-203ENST00000328863 TGM5O43548 720 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms