RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 HNRNPH3P31942 346 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 SCNN1GP51170 649 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 MFAP3P55082 362 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 SOX4Q06945 474 aaPredicted RBP11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 GRIK3Q13003 919 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 TSR1Q2NL82 804 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 SPOPLQ6IQ16 392 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 GLB1LQ6UWU2 654 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 TMEM130Q8N3G9 435 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 TATDN2Q93075 761 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 ABHD8Q96I13 439 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 FAXDC2Q96IV6 333 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 KREMEN1Q96MU8 473 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 NIF3L1Q9GZT8 377 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 VRTNQ9H8Y1 702 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 RNF19AQ9NV58 838 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 PRKAG2Q9UGJ0 569 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 PLAGL2Q9UPG8 496 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 AGAP1Q9UPQ3 857 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 R3HCC1Q9Y3T6 440 aaKnown RBP11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 NUB1Q9Y5A7 615 aa11.02□□□□□ -0.65
VIPAS39-201ENST00000327028 ANO9A1A5B4 782 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 F8VZ95 297 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 OFD1O75665 1012 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 THP07101 528 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 CSF2RAP15509 400 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 CUL2Q13617 745 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 IKBKEQ14164 716 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 DRAP1Q14919 205 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 NAB2Q15742 525 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 MEA1Q16626 185 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 CLLU1OSQ5K130 101 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 C9orf57Q5W0N0 161 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 E4F1Q66K89 784 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 NPAS4Q8IUM7 802 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 FMNL3Q8IVF7 1028 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 RPUSD2Q8IZ73 545 aaKnown RBP11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 LRRC52Q8N7C0 313 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 GPR88Q9GZN0 384 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 NRDCO43847 1150 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 CLSTN1O94985 981 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 LRPAP1P30533 357 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 STAT1P42224 750 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 CCZ1BP86790 482 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 CCZ1P86791 482 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 ARHGAP44Q17R89 818 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 SFMBT2Q5VUG0 894 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 SMYD5Q6GMV2 418 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 TMEM139Q8IV31 216 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 C7orf61Q8IZ16 206 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 KAT5Q92993 513 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 JAKMIP2Q96AA8 810 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 ELMO3Q96BJ8 720 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 HPDLQ96IR7 371 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 BAG1Q99933 345 aaPredicted RBP11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 HTATIP2Q9BUP3 242 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 ZNHIT6Q9NWK9 470 aaKnown RBP11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 MIOSQ9NXC5 875 aa11.01□□□□□ -0.65
VIPAS39-201ENST00000327028 ABHD14A-ACY1A0A1B0GW23 586 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 HOXA2O43364 376 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 EFCAB14O75071 495 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 FGFR1P11362 822 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 SOX5P35711 763 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 AFF1P51825 1210 aaKnown RBP11□□□□□ -0.65
VIPAS39-201ENST00000327028 CDK17Q00537 523 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 MYO1EQ12965 1108 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 ASIC2Q16515 512 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 ZNF667Q5HYK9 610 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 COL13A1Q5TAT6 717 aaPredicted RBP11□□□□□ -0.65
VIPAS39-201ENST00000327028 CRIPAKQ8N1N5 446 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 URGCPQ8TCY9 931 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 RSPH1Q8WYR4 309 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 SHC3Q92529 594 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 ZNF560Q96MR9 790 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 IL23AQ9NPF7 189 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 AIPL1Q9NZN9 384 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 LRFN2Q9ULH4 789 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 INPP5FQ9Y2H2 1132 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 PCDHB7Q9Y5E2 793 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11□□□□□ -0.65
VIPAS39-201ENST00000327028 SCN1AP35498 2009 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 PIRO00625 290 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 P4HA1P13674 534 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 PNPLA4P41247 253 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 ASPAP45381 313 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 PPIGQ13427 754 aaKnown RBP eCLIP11□□□□□ -0.658e-7■■■□□ 16.4
VIPAS39-201ENST00000327028 NOMO2Q5JPE7 1267 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 WDR59Q6PJI9 974 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 ZNF830Q96NB3 372 aaPredicted RBP11□□□□□ -0.65
VIPAS39-201ENST00000327028 ARID3AQ99856 593 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 GOLGA2P5Q9HBQ8 144 aa11□□□□□ -0.65
VIPAS39-201ENST00000327028 PPEF2O14830 753 aa10.99□□□□□ -0.65
VIPAS39-201ENST00000327028 BAIAP3O94812 1187 aa10.99□□□□□ -0.65
VIPAS39-201ENST00000327028 POMCP01189 267 aa10.99□□□□□ -0.65
VIPAS39-201ENST00000327028 FERP16591 822 aa10.99□□□□□ -0.65
VIPAS39-201ENST00000327028 TUSC3Q13454 348 aa10.99□□□□□ -0.65
VIPAS39-201ENST00000327028 CYP26C1Q6V0L0 522 aa10.99□□□□□ -0.65
VIPAS39-201ENST00000327028 TMTC1Q8IUR5 882 aa10.99□□□□□ -0.65
VIPAS39-201ENST00000327028 UBR7Q8N806 425 aa10.99□□□□□ -0.65
VIPAS39-201ENST00000327028 UROC1Q96N76 676 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms