RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 CELF4Q9BZC1 486 aaKnown RBP7.41□□□□□ -1.22
SMC1A-201ENST00000322213 POLE3Q9NRF9 147 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 DOCK9Q9BZ29 2069 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 NEO1Q92859 1461 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 CDH3P22223 829 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 ROR1Q01973 937 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 IL17REQ8NFR9 667 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 CCDC127Q96BQ5 260 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 TRIM9Q9C026 710 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 IP6K2Q9UHH9 426 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 CCPG1Q9ULG6 757 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 TRPM6Q9BX84 2022 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 USP17L12C9JPN9 530 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 USP17L21D6R901 530 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 ATP1A4Q13733 1029 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 ZNF280DQ6N043 979 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 ADSSL1Q8N142 457 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 DNAAF3Q8N9W5 541 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 NACC1Q96RE7 527 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 HMG20AQ9NP66 347 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 TAGLN3Q9UI15 199 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 ZNF318Q5VUA4 2279 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 MROH7Q68CQ1 1323 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 WDR47O94967 919 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 UNC5CO95185 931 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 RARGP13631 454 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 MCL1Q07820 350 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 PABPC4Q13310 644 aaKnown RBP eCLIP7.41□□□□□ -1.223e-9■□□□□ 9.7
SMC1A-201ENST00000322213 ARAP2Q8WZ64 1704 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 ARHGEF1Q92888 912 aaKnown RBP7.41□□□□□ -1.22
SMC1A-201ENST00000322213 GLG1Q92896 1179 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 LRRC59Q96AG4 307 aaKnown RBP7.41□□□□□ -1.22
SMC1A-201ENST00000322213 EPAS1Q99814 870 aa7.41□□□□□ -1.22
SMC1A-201ENST00000322213 SMAPO00193 183 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 BCL10O95999 233 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 KLK7P49862 253 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 OASLQ15646 514 aaKnown RBP7.4□□□□□ -1.22
SMC1A-201ENST00000322213 CDKAL1Q5VV42 579 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 OR9Q1Q8NGQ5 310 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 GDPD5Q8WTR4 605 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 ACAP3Q96P50 834 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 EURLQ9NYK6 297 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 DNAJC12Q9UKB3 198 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 POLR2EP19388 210 aaKnown RBP7.4□□□□□ -1.22
SMC1A-201ENST00000322213 PTK7Q13308 1070 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 SYCP2LQ5T4T6 812 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 PEX5LQ8IYB4 626 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 RASGRP4Q8TDF6 673 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 PTPRMP28827 1452 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 GOLGA8RI6L899 631 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 DDX39AO00148 427 aaKnown RBP7.4□□□□□ -1.22
SMC1A-201ENST00000322213 ANGPT2O15123 496 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 CLIC2O15247 247 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 PLEKP08567 350 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-201ENST00000322213 EPHB2P29323 1055 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 NCKAP1LP55160 1127 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 PTENP60484 403 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 ZNF200P98182 395 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-201ENST00000322213 PTPN12Q05209 780 aaKnown RBP7.4□□□□□ -1.22
SMC1A-201ENST00000322213 MIGA2Q7L4E1 593 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 NET1Q7Z628 596 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-201ENST00000322213 TAB3Q8N5C8 712 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-201ENST00000322213 TGFBRAP1Q8WUH2 860 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 C1orf54Q8WWF1 131 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 NCLNQ969V3 563 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 CCSER1Q9C0I3 900 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 KIAA1683Q9H0B3 1180 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 STARD13Q9Y3M8 1113 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 GOLGA8TH3BQL2 631 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 GOLGA8HP0CJ92 632 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 STX3Q13277 289 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 CREG2Q8IUH2 290 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 PASD1Q8IV76 773 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 EXOC8Q8IYI6 725 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 MAGED4Q96JG8 741 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 MAP3K14Q99558 947 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 RIOK1Q9BRS2 568 aaKnown RBP7.4□□□□□ -1.22
SMC1A-201ENST00000322213 ABCF3Q9NUQ8 709 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 A0A0A6YYK5 440 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-201ENST00000322213 NPTXRO95502 500 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 KRT19P08727 400 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 CENPCQ03188 943 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 CBX3Q13185 183 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 TRADDQ15628 312 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 TRIM67Q6ZTA4 783 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 PRCCQ92733 491 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-201ENST00000322213 C18orf8Q96DM3 657 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 TMA16Q96EY4 203 aaKnown RBP7.4□□□□□ -1.22
SMC1A-201ENST00000322213 CNDP1Q96KN2 507 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 FHDC1Q9C0D6 1143 aaPredicted RBP7.4□□□□□ -1.22
SMC1A-201ENST00000322213 DMTF1Q9Y222 760 aa7.4□□□□□ -1.22
SMC1A-201ENST00000322213 H3BNX3 289 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 CDH2P19022 906 aaPredicted RBP7.4□□□□□ -1.23
SMC1A-201ENST00000322213 EIF6P56537 245 aaKnown RBP7.4□□□□□ -1.23
SMC1A-201ENST00000322213 IFRD2Q12894 506 aaPredicted RBP7.4□□□□□ -1.23
SMC1A-201ENST00000322213 FAAH2Q6GMR7 532 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 RBM46Q8TBY0 533 aaKnown RBP7.4□□□□□ -1.23
SMC1A-201ENST00000322213 KCNB2Q92953 911 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 UVRAGQ9P2Y5 699 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 MARCOQ9UEW3 520 aaPredicted RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms