RNA–Protein interactions for RNA: ENST00000319172.9

TMEM39A-201, Transcript of transmembrane protein 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM39A, Length 4,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-201ENST00000319172 LYPLA2O95372 231 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 PBX1P40424 430 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 NOL9Q5SY16 702 aaKnown RBP9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 CEP120Q8N960 986 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 GLT1D1Q96MS3 346 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 WNT8AQ9H1J5 351 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 DPP3Q9NY33 737 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 UVRAGQ9P2Y5 699 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 IP6K2Q9UHH9 426 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 MAD1L1Q9Y6D9 718 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 NRAPQ86VF7 1730 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 MYH7P12883 1935 aa9.87□□□□□ -0.83
TMEM39A-201ENST00000319172 DDX3XO00571 662 aaKnown RBP eCLIP9.87□□□□□ -0.832e-10■■■■□ 21.8
TMEM39A-201ENST00000319172 POC1B-GALNT4F8VUJ3 575 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 MYBL1P10243 752 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 PHLDB3Q6NSJ2 640 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 CEP128Q6ZU80 1094 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 MICALCLQ6ZW33 695 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 BAP1Q92560 729 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 TSNARE1Q96NA8 513 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 NT5C1AQ9BXI3 368 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 ZCCHC17Q9NP64 241 aaKnown RBP9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 KCNH4Q9UQ05 1017 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 B4GALT5O43286 388 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 RNF40O75150 1001 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 TJP3O95049 919 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 PGK1P00558 417 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 ITGA4P13612 1032 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 RRM1P23921 792 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 AKAP5P24588 427 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 MAN1A1P33908 653 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 LMNB2Q03252 620 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 BMT2Q1RMZ1 405 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 PAN2Q504Q3 1202 aaKnown RBP9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 IQSEC1Q6DN90 963 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 CCDC137Q6PK04 289 aaKnown RBP9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 CXCL17Q6UXB2 119 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 APPL2Q8NEU8 664 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 RBM41Q96IZ5 413 aaKnown RBP9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 CISHQ9NSE2 258 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 ASNSD1Q9NWL6 643 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 SNTG2Q9NY99 539 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 MAGED2Q9UNF1 606 aaPredicted RBP9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 RCCD1A6NED2 376 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 EBAG9O00559 213 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 COBLL1Q53SF7 1204 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 ZPBP2Q6X784 338 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 ACSF2Q96CM8 615 aaPredicted RBP9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 MED4Q9NPJ6 270 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 ZNF112Q9UJU3 913 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 TTI1O43156 1089 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 MAFO75444 373 aaPredicted RBP9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 ACSL3O95573 720 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 PDGFRAP16234 1089 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 TNFSF9P41273 254 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 ARHGAP25P42331 645 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 CDH8P55286 799 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 YWHAGP61981 247 aaKnown RBP eCLIP9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 MFSD10Q14728 455 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 SPRYD7Q5W111 196 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 GPR20Q99678 358 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 TRIM51Q9BSJ1 452 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 CALCOCO1Q9P1Z2 691 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 GTF3C4Q9UKN8 822 aa9.86□□□□□ -0.83
TMEM39A-201ENST00000319172 ZBTB22O15209 634 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 DHX15O43143 795 aaKnown RBP9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 KCNJ1P48048 391 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 FSTL1Q12841 308 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 MAPK8IP2Q13387 824 aaPredicted RBP9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 ZCWPW2Q504Y3 356 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 GLE1Q53GS7 698 aaKnown RBP9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 EEF1DP3Q658K8 133 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 ACAD10Q6JQN1 1059 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 EMBQ6PCB8 327 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 KIAA0319LQ8IZA0 1049 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 FAM71BQ8TC56 605 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 GANQ9H2C0 597 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 DIS3Q9Y2L1 958 aaKnown RBP9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 HES2Q9Y543 173 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 SLX4Q8IY92 1834 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 GRID2IPA4D2P6 1211 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 NKRFO15226 690 aaKnown RBP eCLIP9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 ATP5DP30049 168 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 GNGT1P63211 74 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 FKBP1BP68106 108 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 NME3Q13232 169 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 PSMD6Q15008 389 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 FSCN1Q16658 493 aaKnown RBP9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 SMTNL2Q2TAL5 461 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 HP1BP3Q5SSJ5 553 aaPredicted RBP9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 RNF180Q86T96 592 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 ACOT1Q86TX2 421 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 WDR49Q8IV35 697 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 BRSK2Q8IWQ3 736 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 TNIP3Q96KP6 325 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 RUNDC3BQ96NL0 473 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 CELF4Q9BZC1 486 aaKnown RBP9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 IFT122Q9HBG6 1241 aa9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 TNRC6CQ9HCJ0 1690 aaKnown RBP9.85□□□□□ -0.83
TMEM39A-201ENST00000319172 CACNA1SQ13698 1873 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms