RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 MEI4A8MW99 385 aa10.21□□□□□ -0.77
RPGR-201ENST00000318842 PODXLO00592 558 aa10.21□□□□□ -0.77
RPGR-201ENST00000318842 SLC16A3O15427 465 aaKnown RBP10.21□□□□□ -0.77
RPGR-201ENST00000318842 SPATA31D3P0C874 917 aa10.21□□□□□ -0.77
RPGR-201ENST00000318842 GNAZP19086 355 aa10.21□□□□□ -0.77
RPGR-201ENST00000318842 MAGEA4P43358 317 aa10.21□□□□□ -0.77
RPGR-201ENST00000318842 GPS1Q13098 491 aa10.21□□□□□ -0.77
RPGR-201ENST00000318842 SPATA31D4Q6ZUB0 917 aa10.21□□□□□ -0.77
RPGR-201ENST00000318842 ZNF365Q70YC5 407 aa10.21□□□□□ -0.77
RPGR-201ENST00000318842 ALYREFQ86V81 257 aaKnown RBP10.21□□□□□ -0.77
RPGR-201ENST00000318842 DCLK3Q9C098 648 aa10.21□□□□□ -0.77
RPGR-201ENST00000318842 RNPEPL1Q9HAU8 725 aa10.21□□□□□ -0.77
RPGR-201ENST00000318842 ACSS2Q9NR19 701 aa10.21□□□□□ -0.77
RPGR-201ENST00000318842 PRR12Q9ULL5 1215 aa10.21□□□□□ -0.77
RPGR-201ENST00000318842 E5RJQ4 531 aa10.21□□□□□ -0.78
RPGR-201ENST00000318842 ITGBL1O95965 494 aaPredicted RBP10.21□□□□□ -0.78
RPGR-201ENST00000318842 BCRP11274 1271 aa10.21□□□□□ -0.78
RPGR-201ENST00000318842 DSG3P32926 999 aa10.21□□□□□ -0.78
RPGR-201ENST00000318842 HIRAP54198 1017 aaPredicted RBP10.21□□□□□ -0.78
RPGR-201ENST00000318842 SLC8A3P57103 927 aa10.21□□□□□ -0.78
RPGR-201ENST00000318842 TFDP1Q14186 410 aa10.21□□□□□ -0.78
RPGR-201ENST00000318842 CRELD2Q6UXH1 353 aaPredicted RBP10.21□□□□□ -0.78
RPGR-201ENST00000318842 RHOT2Q8IXI1 618 aa10.21□□□□□ -0.78
RPGR-201ENST00000318842 TEKT4Q8WW24 435 aa10.21□□□□□ -0.78
RPGR-201ENST00000318842 AGBL1Q96MI9 1066 aa10.21□□□□□ -0.78
RPGR-201ENST00000318842 SPATS2LQ9NUQ6 558 aaKnown RBP10.21□□□□□ -0.78
RPGR-201ENST00000318842 TJP2Q9UDY2 1190 aa10.21□□□□□ -0.78
RPGR-201ENST00000318842 FZD1Q9UP38 647 aa10.21□□□□□ -0.78
RPGR-201ENST00000318842 ZNF148Q9UQR1 794 aa10.21□□□□□ -0.78
RPGR-201ENST00000318842 SBF2Q86WG5 1849 aa10.21□□□□□ -0.78
RPGR-201ENST00000318842 TCP10L2B9ZVM9 353 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 AVILO75366 819 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 SERPINB3P29508 390 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 POLGP54098 1239 aaPredicted RBP10.2□□□□□ -0.78
RPGR-201ENST00000318842 GDF10P55107 478 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 PPP2R5CQ13362 524 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 RIPK1Q13546 671 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 SPARCL1Q14515 664 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 CCDC6Q16204 474 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 ZBTB41Q5SVQ8 909 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 GPATCH4Q5T3I0 446 aaKnown RBP10.2□□□□□ -0.78
RPGR-201ENST00000318842 RINLQ6ZS11 566 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 CYFIP1Q7L576 1253 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 FBF1Q8TES7 1133 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 TAOK3Q9H2K8 898 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 CNOT7Q9UIV1 285 aaKnown RBP10.2□□□□□ -0.78
RPGR-201ENST00000318842 LAMA2P24043 3122 aaKnown RBP10.2□□□□□ -0.78
RPGR-201ENST00000318842 XIRP1Q702N8 1843 aaKnown RBP10.2□□□□□ -0.78
RPGR-201ENST00000318842 FAM47DPA6NHR8 397 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 RPS6KA4O75676 772 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 ITGB5P18084 799 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 CNGA1P29973 690 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 SREBF1P36956 1147 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 ACSBG2Q5FVE4 666 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 NLRP9Q7RTR0 991 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 NETO2Q8NC67 525 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 STK32AQ8WU08 396 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 CADM1Q9BY67 442 aaKnown RBP10.2□□□□□ -0.78
RPGR-201ENST00000318842 COL20A1Q9P218 1284 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 FAM198AQ9UFP1 575 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 GAKO14976 1311 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 PSMD10O75832 226 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 NEFHP12036 1026 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 CALB2P22676 271 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 ACOT2P49753 483 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 ARSEP51690 589 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 PDIA2Q13087 525 aaKnown RBP10.2□□□□□ -0.78
RPGR-201ENST00000318842 USP4Q13107 963 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 BMT2Q1RMZ1 405 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 ZNF568Q3ZCX4 644 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 MFSD5Q6N075 450 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 C11orf63Q6NUN7 778 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 CCDC125Q86Z20 511 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 TTC17Q96AE7 1141 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 IFT74Q96LB3 600 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 PGLYRP2Q96PD5 576 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 ABCA3Q99758 1704 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 FAM213AQ9BRX8 229 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 OLFML3Q9NRN5 406 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 DMAC2Q9NW81 257 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 CYP39A1Q9NYL5 469 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 ZFP69BQ9UJL9 534 aa10.2□□□□□ -0.78
RPGR-201ENST00000318842 SPATA31A5Q5VU36 1347 aa10.19□□□□□ -0.78
RPGR-201ENST00000318842 SPATA31A7Q8IWB4 1347 aa10.19□□□□□ -0.78
RPGR-201ENST00000318842 F8VP50 259 aa10.19□□□□□ -0.78
RPGR-201ENST00000318842 IPO5O00410 1097 aaKnown RBP10.19□□□□□ -0.78
RPGR-201ENST00000318842 CAPN9O14815 690 aa10.19□□□□□ -0.78
RPGR-201ENST00000318842 GRIN3BO60391 1043 aa10.19□□□□□ -0.78
RPGR-201ENST00000318842 ASMTLO95671 621 aa10.19□□□□□ -0.78
RPGR-201ENST00000318842 SERPINB2P05120 415 aa10.19□□□□□ -0.78
RPGR-201ENST00000318842 NOVP48745 357 aa10.19□□□□□ -0.78
RPGR-201ENST00000318842 SETDB1Q15047 1291 aa10.19□□□□□ -0.78
RPGR-201ENST00000318842 SNRNP35Q16560 246 aaKnown RBP10.19□□□□□ -0.78
RPGR-201ENST00000318842 RAB6CQ53S08 254 aa10.19□□□□□ -0.78
RPGR-201ENST00000318842 CYP4A22Q5TCH4 519 aa10.19□□□□□ -0.78
RPGR-201ENST00000318842 FAXCQ5TGI0 409 aa10.19□□□□□ -0.78
RPGR-201ENST00000318842 HHATQ5VTY9 493 aa10.19□□□□□ -0.78
RPGR-201ENST00000318842 HAUS6Q7Z4H7 955 aa10.19□□□□□ -0.78
RPGR-201ENST00000318842 SPNS2Q8IVW8 549 aa10.19□□□□□ -0.78
RPGR-201ENST00000318842 LRRC8CQ8TDW0 803 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms