RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PALB2Q86YC2 1186 aa13.97□□□□□ -0.17
CPNE1-201ENST00000317677 LINC01465Q8N7H1 131 aa13.97□□□□□ -0.17
CPNE1-201ENST00000317677 RNF149Q8NC42 400 aa13.97□□□□□ -0.17
CPNE1-201ENST00000317677 PPTC7Q8NI37 304 aa13.97□□□□□ -0.17
CPNE1-201ENST00000317677 HELQQ8TDG4 1101 aa13.97□□□□□ -0.17
CPNE1-201ENST00000317677 ARL8AQ96BM9 186 aa13.97□□□□□ -0.17
CPNE1-201ENST00000317677 RABEP2Q9H5N1 569 aa13.97□□□□□ -0.17
CPNE1-201ENST00000317677 FLRT1Q9NZU1 646 aa13.97□□□□□ -0.17
CPNE1-201ENST00000317677 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.97□□□□□ -0.17
CPNE1-201ENST00000317677 CNTNAP2Q9UHC6 1331 aa13.96□□□□□ -0.17
CPNE1-201ENST00000317677 AHCYL1O43865 530 aa13.96□□□□□ -0.17
CPNE1-201ENST00000317677 HSF2BPO75031 334 aa13.96□□□□□ -0.17
CPNE1-201ENST00000317677 GHRP10912 638 aa13.96□□□□□ -0.17
CPNE1-201ENST00000317677 RFX1P22670 979 aa13.96□□□□□ -0.17
CPNE1-201ENST00000317677 GPC3P51654 580 aa13.96□□□□□ -0.17
CPNE1-201ENST00000317677 EPHB4P54760 987 aa13.96□□□□□ -0.17
CPNE1-201ENST00000317677 ENPEPQ07075 957 aa13.96□□□□□ -0.17
CPNE1-201ENST00000317677 ACVR2BQ13705 512 aa13.96□□□□□ -0.17
CPNE1-201ENST00000317677 SND1Q7KZF4 910 aaKnown RBP eCLIP13.96□□□□□ -0.17
CPNE1-201ENST00000317677 CCHCR1Q8TD31 782 aa13.96□□□□□ -0.17
CPNE1-201ENST00000317677 ERAP1Q9NZ08 941 aa13.96□□□□□ -0.17
CPNE1-201ENST00000317677 ANKFY1Q9P2R3 1169 aa13.96□□□□□ -0.17
CPNE1-201ENST00000317677 SUCLA2Q9P2R7 463 aaPredicted RBP13.96□□□□□ -0.17
CPNE1-201ENST00000317677 DAAM1Q9Y4D1 1078 aa13.96□□□□□ -0.17
CPNE1-201ENST00000317677 ANO9A1A5B4 782 aa13.96□□□□□ -0.18
CPNE1-201ENST00000317677 GAS2O43903 313 aaKnown RBP13.96□□□□□ -0.18
CPNE1-201ENST00000317677 HOXD8P13378 290 aaPredicted RBP13.96□□□□□ -0.18
CPNE1-201ENST00000317677 GTF2H1P32780 548 aa13.96□□□□□ -0.18
CPNE1-201ENST00000317677 MDH1P40925 334 aaKnown RBP13.96□□□□□ -0.18
CPNE1-201ENST00000317677 RAB27AP51159 221 aa13.96□□□□□ -0.18
CPNE1-201ENST00000317677 ARHGEF6Q15052 776 aa13.96□□□□□ -0.18
CPNE1-201ENST00000317677 KIAA0753Q2KHM9 967 aa13.96□□□□□ -0.18
CPNE1-201ENST00000317677 DUSP28Q4G0W2 176 aa13.96□□□□□ -0.18
CPNE1-201ENST00000317677 PRAMEF19Q5SWL8 479 aa13.96□□□□□ -0.18
CPNE1-201ENST00000317677 CAPRIN2Q6IMN6 1127 aaKnown RBP13.96□□□□□ -0.18
CPNE1-201ENST00000317677 EFCAB12Q6NXP0 572 aa13.96□□□□□ -0.18
CPNE1-201ENST00000317677 ALKBH5Q6P6C2 394 aaKnown RBP13.96□□□□□ -0.18
CPNE1-201ENST00000317677 RHPN2Q8IUC4 686 aa13.96□□□□□ -0.18
CPNE1-201ENST00000317677 GLYCTKQ8IVS8 523 aa13.96□□□□□ -0.18
CPNE1-201ENST00000317677 SLC20A1Q8WUM9 679 aa13.96□□□□□ -0.18
CPNE1-201ENST00000317677 OSBPL9Q96SU4 736 aa13.96□□□□□ -0.18
CPNE1-201ENST00000317677 MSTO1Q9BUK6 570 aa13.96□□□□□ -0.18
CPNE1-201ENST00000317677 MINDY3Q9H8M7 445 aa13.96□□□□□ -0.18
CPNE1-201ENST00000317677 TULP1O00294 542 aaPredicted RBP13.95□□□□□ -0.18
CPNE1-201ENST00000317677 VNN1O95497 513 aa13.95□□□□□ -0.18
CPNE1-201ENST00000317677 C4BPAP04003 597 aaKnown RBP13.95□□□□□ -0.18
CPNE1-201ENST00000317677 PRKCBP05771 671 aa13.95□□□□□ -0.18
CPNE1-201ENST00000317677 ANXA13P27216 316 aa13.95□□□□□ -0.18
CPNE1-201ENST00000317677 TNFSF9P41273 254 aa13.95□□□□□ -0.18
CPNE1-201ENST00000317677 IGBP1P78318 339 aa13.95□□□□□ -0.18
CPNE1-201ENST00000317677 CETN1Q12798 172 aa13.95□□□□□ -0.18
CPNE1-201ENST00000317677 PRPF4BQ13523 1007 aaKnown RBP13.95□□□□□ -0.18
CPNE1-201ENST00000317677 MXD4Q14582 209 aaPredicted RBP13.95□□□□□ -0.18
CPNE1-201ENST00000317677 GLE1Q53GS7 698 aaKnown RBP13.95□□□□□ -0.18
CPNE1-201ENST00000317677 ANKRD20A8PQ5CZ79 823 aa13.95□□□□□ -0.18
CPNE1-201ENST00000317677 C17orf99Q6UX52 265 aa13.95□□□□□ -0.18
CPNE1-201ENST00000317677 ZPBP2Q6X784 338 aa13.95□□□□□ -0.18
CPNE1-201ENST00000317677 IQCKQ8N0W5 287 aa13.95□□□□□ -0.18
CPNE1-201ENST00000317677 FBXL13Q8NEE6 735 aa13.95□□□□□ -0.18
CPNE1-201ENST00000317677 TRIM58Q8NG06 486 aa13.95□□□□□ -0.18
CPNE1-201ENST00000317677 RNPC3Q96LT9 517 aaKnown RBP13.95□□□□□ -0.18
CPNE1-201ENST00000317677 RUFY1Q96T51 708 aa13.95□□□□□ -0.18
CPNE1-201ENST00000317677 ACO2Q99798 780 aaKnown RBP13.95□□□□□ -0.18
CPNE1-201ENST00000317677 PI4K2AQ9BTU6 479 aa13.95□□□□□ -0.18
CPNE1-201ENST00000317677 ABHD16BQ9H3Z7 469 aa13.95□□□□□ -0.18
CPNE1-201ENST00000317677 RAB20Q9NX57 234 aa13.95□□□□□ -0.18
CPNE1-201ENST00000317677 DNM1LO00429 736 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 ZNF185O15231 689 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 B4GALT5O43286 388 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 NCK2O43639 380 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 COQ9O75208 318 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 TACC1O75410 805 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 SMNDC1O75940 238 aaKnown RBP eCLIP13.94□□□□□ -0.181e-15■■■■□ 21.1
CPNE1-201ENST00000317677 MMP3P08254 477 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 IQCF3P0C7M6 154 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 EFNA5P52803 228 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 SP3Q02447 781 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 TDRD10Q5VZ19 366 aaKnown RBP13.94□□□□□ -0.18
CPNE1-201ENST00000317677 SLFN12LQ6IEE8 588 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 BZW1Q7L1Q6 419 aaKnown RBP13.94□□□□□ -0.18
CPNE1-201ENST00000317677 U2AF1L4Q8WU68 220 aaKnown RBP13.94□□□□□ -0.18
CPNE1-201ENST00000317677 SHC3Q92529 594 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 USP6NLQ92738 828 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 GDAP1L1Q96MZ0 367 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 SCLT1Q96NL6 688 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 FZD8Q9H461 694 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 KIAA1586Q9HCI6 787 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 ACP6Q9NPH0 428 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 TAS2R14Q9NYV8 317 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 FAM170AA1A519 330 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 BTNL10A8MVZ5 291 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 PDE2AO00408 941 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-201ENST00000317677 KIAA0391O15091 583 aaKnown RBP13.94□□□□□ -0.18
CPNE1-201ENST00000317677 AP1G2O75843 785 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 RTN3O95197 1032 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-201ENST00000317677 HARSP12081 509 aaKnown RBP13.94□□□□□ -0.18
CPNE1-201ENST00000317677 CHRNB2P17787 502 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 PROZP22891 400 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 MBTD1Q05BQ5 628 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 MAP2K5Q13163 448 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms