RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 PTENP60484 403 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 GNGT1P63211 74 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 MXD4Q14582 209 aaPredicted RBP15.17■□□□□ 0.02
VRK3-201ENST00000316763 BRDTQ58F21 947 aaPredicted RBP15.17■□□□□ 0.02
VRK3-201ENST00000316763 ZSWIM2Q8NEG5 633 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 SEC14L1Q92503 715 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 SHC3Q92529 594 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 FAM81BQ96LP2 452 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 MFSD14AQ96MC6 490 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.17■□□□□ 0.02
VRK3-201ENST00000316763 COG5Q9UP83 839 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 FRMPD3Q5JV73 1810 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 FAM187AA6NFU0 413 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 TTI1O43156 1089 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 MTA2O94776 668 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 PGK1P00558 417 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 F2P00734 622 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 ECHS1P30084 290 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 ADSSP30520 456 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 GJA9P57773 515 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 CAPSQ13938 189 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 LHX8Q68G74 356 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 LINC01465Q8N7H1 131 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 FBXL13Q8NEE6 735 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 EPS8L1Q8TE68 723 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 PSPC1Q8WXF1 523 aaKnown RBP15.17■□□□□ 0.02
VRK3-201ENST00000316763 POMGNT1Q8WZA1 660 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 CCDC127Q96BQ5 260 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 ARMC5Q96C12 935 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 SAAL1Q96ER3 474 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 ZNF333Q96JL9 665 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 TSPYL1Q9H0U9 437 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 WNT8AQ9H1J5 351 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 XPNPEP3Q9NQH7 507 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 RSPH14Q9UHP6 348 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 RASAL2Q9UJF2 1139 aa15.17■□□□□ 0.02
VRK3-201ENST00000316763 NOCTQ9UK39 431 aaKnown RBP15.17■□□□□ 0.02
VRK3-201ENST00000316763 LRRIQ4A6NIV6 560 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 MAGEB2O15479 319 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 CYP26A1O43174 497 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 DAPK3O43293 454 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 GARTP22102 1010 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 HSD17B3P37058 310 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 PDE6CP51160 858 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 BEX3Q00994 111 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 LAMTOR4Q0VGL1 99 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 DHX34Q14147 1143 aaKnown RBP15.16■□□□□ 0.02
VRK3-201ENST00000316763 CEP85LQ5SZL2 805 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 DCAF12L1Q5VU92 463 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 CDCA2Q69YH5 1023 aaPredicted RBP15.16■□□□□ 0.02
VRK3-201ENST00000316763 SLC39A4Q6P5W5 647 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 KDM7AQ6ZMT4 941 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 ENOSF1Q7L5Y1 443 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 NOP9Q86U38 636 aaKnown RBP15.16■□□□□ 0.02
VRK3-201ENST00000316763 DDX42Q86XP3 938 aaKnown RBP eCLIP15.16■□□□□ 0.02
VRK3-201ENST00000316763 LRRC71Q8N4P6 559 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 DEPTORQ8TB45 409 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 ATP6V1G3Q96LB4 118 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 FBXL18Q96ME1 805 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 KREMEN1Q96MU8 473 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 MCOLN1Q9GZU1 580 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 RNF208Q9H0X6 261 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 UPF3AQ9H1J1 476 aaKnown RBP15.16■□□□□ 0.02
VRK3-201ENST00000316763 TMEM134Q9H6X4 195 aa15.16■□□□□ 0.02
VRK3-201ENST00000316763 PAK6Q9NQU5 681 aaPredicted RBP15.16■□□□□ 0.02
VRK3-201ENST00000316763 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.16■□□□□ 0.02
VRK3-201ENST00000316763 MYADML2A6NDP7 307 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 TULP2O00295 520 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 EIF3HO15372 352 aaKnown RBP eCLIP15.15■□□□□ 0.02
VRK3-201ENST00000316763 MSCO60682 206 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 PIGRP01833 764 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 C6orf222P0C671 652 aaPredicted RBP15.15■□□□□ 0.02
VRK3-201ENST00000316763 MYZAPP0CAP1 466 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 CHRNB2P17787 502 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 CPT1AP50416 773 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 DR1Q01658 176 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 CYP24A1Q07973 514 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 SEL1L2Q5TEA6 688 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 EMC10Q5UCC4 262 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 EFCAB12Q6NXP0 572 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 RUFY4Q6ZNE9 571 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 SRLQ86TD4 932 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 GPD1LQ8N335 351 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 KAT2BQ92831 832 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 SEMA4DQ92854 862 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 KAT5Q92993 513 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 BICD1Q96G01 975 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 RAB20Q9NX57 234 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 RRP15Q9Y3B9 282 aaKnown RBP15.15■□□□□ 0.02
VRK3-201ENST00000316763 TMEM110-MUSTN1A8MSY1 372 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 ADAMTS4O75173 837 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 NR1D1P20393 614 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 CTNNA1P35221 906 aaKnown RBP15.15■□□□□ 0.02
VRK3-201ENST00000316763 EFNA5P52803 228 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 CDR2Q01850 454 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 POU5F1Q01860 360 aaKnown RBP15.15■□□□□ 0.02
VRK3-201ENST00000316763 FSCN1Q16658 493 aaKnown RBP15.15■□□□□ 0.02
VRK3-201ENST00000316763 DNAJC21Q5F1R6 531 aaKnown RBP15.15■□□□□ 0.02
VRK3-201ENST00000316763 MARCH8Q5T0T0 291 aa15.15■□□□□ 0.02
VRK3-201ENST00000316763 NAA35Q5VZE5 725 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms