RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 CYFIP2Q96F07 1278 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 ATP6V1G3Q96LB4 118 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 NCAPGQ9BPX3 1015 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 APOL6Q9BWW8 343 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 ARHGAP39Q9C0H5 1083 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 IFT122Q9HBG6 1241 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 OTOFQ9HC10 1997 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 RANBP2P49792 3224 aaKnown RBP8.13□□□□□ -1.11
TRIM55-202ENST00000315962 GOLGA6L7A0A1B0GV03 622 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 ASB14A6NK59 587 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 FOXO6A8MYZ6 492 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 GPR25O00155 361 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 CDC25CP30307 473 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 MAP2K2P36507 400 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 MDH1P40925 334 aaKnown RBP8.13□□□□□ -1.11
TRIM55-202ENST00000315962 SLCO1A2P46721 670 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 FMO1Q01740 532 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 ACVR2BQ13705 512 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 NCOA4Q13772 614 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 WDR44Q5JSH3 913 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 C12orf56Q8IXR9 622 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 FAM71AQ8IYT1 594 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 TAF4BQ92750 862 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 CAVIN3Q969G5 261 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 TBC1D31Q96DN5 1066 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 CCDC114Q96M63 670 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 MYCBPQ99417 103 aaPredicted RBP8.13□□□□□ -1.11
TRIM55-202ENST00000315962 FAM118BQ9BPY3 351 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 TINF2Q9BSI4 451 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 C16orf70Q9BSU1 422 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 EPN3Q9H201 632 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 GDF3Q9NR23 364 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 NOCTQ9UK39 431 aaKnown RBP8.13□□□□□ -1.11
TRIM55-202ENST00000315962 ATP8A1Q9Y2Q0 1164 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 PCDHB4Q9Y5E5 795 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 PCDHGC5Q9Y5F6 944 aa8.13□□□□□ -1.11
TRIM55-202ENST00000315962 PARP14Q460N5 1801 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 GOLGA6L10A6NI86 522 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 DNM1LO00429 736 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 TOM1L1O75674 476 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 MYCP01106 439 aaPredicted RBP8.12□□□□□ -1.11
TRIM55-202ENST00000315962 C4BPAP04003 597 aaKnown RBP8.12□□□□□ -1.11
TRIM55-202ENST00000315962 RPSAP08865 295 aaKnown RBP8.12□□□□□ -1.11
TRIM55-202ENST00000315962 GARTP22102 1010 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 PDE6CP51160 858 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 MAGOHP61326 146 aaKnown RBP8.12□□□□□ -1.11
TRIM55-202ENST00000315962 ZACNQ401N2 412 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 GLRA4Q5JXX5 417 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 ATF7IP2Q5U623 682 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 ALS2CLQ60I27 953 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 KIAA0319LQ8IZA0 1049 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 RNF10Q8N5U6 811 aaKnown RBP8.12□□□□□ -1.11
TRIM55-202ENST00000315962 LRRC57Q8N9N7 239 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 OR6J1Q8NGC5 347 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 ALG3Q92685 438 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 MAGOHBQ96A72 148 aaKnown RBP8.12□□□□□ -1.11
TRIM55-202ENST00000315962 CABS1Q96KC9 395 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 ACO2Q99798 780 aaKnown RBP8.12□□□□□ -1.11
TRIM55-202ENST00000315962 CCDC113Q9H0I3 377 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 ABT1Q9ULW3 272 aaKnown RBP8.12□□□□□ -1.11
TRIM55-202ENST00000315962 SART1O43290 800 aaKnown RBP8.12□□□□□ -1.11
TRIM55-202ENST00000315962 C22orf31O95567 290 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 ECHS1P30084 290 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 RFC5P40937 340 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 SSR1P43307 286 aaKnown RBP8.12□□□□□ -1.11
TRIM55-202ENST00000315962 IFNAR2P48551 515 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 GPC3P51654 580 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 NOP14P78316 857 aaKnown RBP8.12□□□□□ -1.11
TRIM55-202ENST00000315962 SKOR1P84550 965 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 ZNF844Q08AG5 666 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 KIF22Q14807 665 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 WDR72Q3MJ13 1102 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 KRT71Q3SY84 523 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 CCDC38Q502W7 563 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 IER5Q5VY09 327 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 KDM7AQ6ZMT4 941 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 ZNF662Q6ZS27 426 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 PLEKHH3Q7Z736 793 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 ZBTB8OSQ8IWT0 167 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 USP38Q8NB14 1042 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 SHC3Q92529 594 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 ZNF653Q96CK0 615 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 SELENOSQ9BQE4 189 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 SYT11Q9BT88 431 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 MRPL4Q9BYD3 311 aaKnown RBP8.12□□□□□ -1.11
TRIM55-202ENST00000315962 OSBPL7Q9BZF2 842 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 CXorf56Q9H5V9 222 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 MLXIPLQ9NP71 852 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 POLIQ9UNA4 740 aa8.12□□□□□ -1.11
TRIM55-202ENST00000315962 NOC2LQ9Y3T9 749 aaKnown RBP8.12□□□□□ -1.11
TRIM55-202ENST00000315962 LCTP09848 1927 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 CNTNAP2Q9UHC6 1331 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 O00370 1275 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 KRIT1O00522 736 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 KIF4AO95239 1232 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 ITGBL1O95965 494 aaPredicted RBP8.11□□□□□ -1.11
TRIM55-202ENST00000315962 GH1P01241 217 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 FGGP02679 453 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 SHBGP04278 402 aa8.11□□□□□ -1.11
TRIM55-202ENST00000315962 NFICP08651 508 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms