RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 RAB6CQ53S08 254 aa7.5□□□□□ -1.21
LYSMD3-201ENST00000315948 FAM47CQ5HY64 1035 aa7.5□□□□□ -1.21
LYSMD3-201ENST00000315948 WDR44Q5JSH3 913 aa7.5□□□□□ -1.21
LYSMD3-201ENST00000315948 CC2D1AQ6P1N0 951 aaPredicted RBP7.5□□□□□ -1.21
LYSMD3-201ENST00000315948 MMS22LQ6ZRQ5 1243 aa7.5□□□□□ -1.21
LYSMD3-201ENST00000315948 DDX42Q86XP3 938 aaKnown RBP eCLIP7.5□□□□□ -1.21
LYSMD3-201ENST00000315948 C12orf29Q8N999 325 aa7.5□□□□□ -1.21
LYSMD3-201ENST00000315948 ZFP42Q96MM3 310 aa7.5□□□□□ -1.21
LYSMD3-201ENST00000315948 HERPUD2Q9BSE4 406 aa7.5□□□□□ -1.21
LYSMD3-201ENST00000315948 NUP85Q9BW27 656 aa7.5□□□□□ -1.21
LYSMD3-201ENST00000315948 CELF4Q9BZC1 486 aaKnown RBP7.5□□□□□ -1.21
LYSMD3-201ENST00000315948 RAB6CQ9H0N0 254 aa7.5□□□□□ -1.21
LYSMD3-201ENST00000315948 DDX47Q9H0S4 455 aaKnown RBP7.5□□□□□ -1.21
LYSMD3-201ENST00000315948 ERVK-5Q9HDB9 667 aa7.5□□□□□ -1.21
LYSMD3-201ENST00000315948 KIF4AO95239 1232 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 ASS1P00966 412 aaKnown RBP7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 TUBB4AP04350 444 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 TMEM191BP0C7N4 346 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 POLR2BP30876 1174 aaKnown RBP7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 RPL7AP62424 266 aaKnown RBP7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 CDR2Q01850 454 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 IQSEC1Q6DN90 963 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 SLFN12LQ6IEE8 588 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 ANKS1BQ7Z6G8 1248 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 ZNF467Q7Z7K2 595 aaPredicted RBP7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 CXorf38Q8TB03 319 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 EMID1Q96A84 441 aaPredicted RBP7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 KRT12Q99456 494 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 CISHQ9NSE2 258 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 CYTH4Q9UIA0 394 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 NME7Q9Y5B8 376 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 ALG6Q9Y672 507 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 P4HA2O15460 535 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 THAP12O43422 761 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 COMTP21964 271 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 GNA15P30679 374 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 PHKA2P46019 1235 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 ATP13A4Q4VNC1 1196 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 ZNF484Q5JVG2 852 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 VPS36Q86VN1 386 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 C1orf131Q8NDD1 294 aaKnown RBP7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 ERLIN2O94905 339 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 SLC26A2P50443 739 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 PURAQ00577 322 aaKnown RBP7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 CACNB2Q08289 660 aaPredicted RBP7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 RPS6KA1Q15418 735 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 ZNF699Q32M78 642 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 CEP112Q8N8E3 955 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 RIN2Q8WYP3 895 aaPredicted RBP7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 RFFLQ8WZ73 363 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 ISCUQ9H1K1 167 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 ZFYVE28Q9HCC9 887 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 ANO9A1A5B4 782 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 TULP2O00295 520 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 TMEM253P0C7T8 217 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 SNRPFP62306 86 aaKnown RBP7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 LACTBP83111 547 aaPredicted RBP7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 GCNT1Q02742 428 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 CCDC181Q5TID7 509 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 CATSPER4Q7RTX7 472 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 WDTC1Q8N5D0 677 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 GTF3C2Q8WUA4 911 aaPredicted RBP7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 LPPQ93052 612 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 PIWIL1Q96J94 861 aaKnown RBP7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 PDCL3Q9H2J4 239 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 RPF1Q9H9Y2 349 aaKnown RBP7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 PIN4Q9Y237 131 aaKnown RBP7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 TNFSF13BQ9Y275 285 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 STXBP5LQ9Y2K9 1186 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 SCN1AP35498 2009 aa7.49□□□□□ -1.21
LYSMD3-201ENST00000315948 ANKRD62A6NC57 917 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 H0YCG3 227 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 DDX3YO15523 660 aaKnown RBP7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 UNGP13051 313 aaPredicted RBP7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 TMOD1P28289 359 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 PSEN2P49810 448 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 SOX4Q06945 474 aaPredicted RBP7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 PDE4CQ08493 712 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 TFDP1Q14186 410 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 DUOXA2Q1HG44 320 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 TXNRD3NBQ6F5E7 133 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 GDF6Q6KF10 455 aaPredicted RBP7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 RNF10Q8N5U6 811 aaKnown RBP7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 GPR161Q8N6U8 529 aaKnown RBP7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 ZNF606Q8WXB4 792 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 MAP7D2Q96T17 732 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 APBA2Q99767 749 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 TRIM31Q9BZY9 425 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 CNOT8Q9UFF9 292 aaKnown RBP7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 AGAP1Q9UPQ3 857 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 SIP14410 1827 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 A0A1B0GUA9 196 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 TMEM88BA6NKF7 163 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 FGGP02679 453 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 FAM153BP0C7A2 387 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 HOXD8P13378 290 aaPredicted RBP7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 TRPC3Q13507 836 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 CLEC16AQ2KHT3 1053 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 NBPF20Q3BBV1 942 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 FAM153CQ494X1 144 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms