RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 PVALEFA0A1B0GWK0 134 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 SLC15A5A6NIM6 579 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 CAPN2P17655 700 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 HSD17B4P51659 736 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 C11orf96Q7Z7L8 435 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 TRIM48Q8IWZ4 208 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 IDI2Q9BXS1 227 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 ATP8A1Q9Y2Q0 1164 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 RFX7Q2KHR2 1363 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 TCRBV5S4A2TA0A5A2 114 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 NFKBIEO00221 500 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 PNMA6AP0CW24 399 aaPredicted RBP9.52□□□□□ -0.89
CTC1-201ENST00000315684 KRT3P12035 628 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 PAMP19021 973 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 MMEL1Q495T6 779 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 GPAT2Q6NUI2 795 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 BZW1Q7L1Q6 419 aaKnown RBP9.52□□□□□ -0.89
CTC1-201ENST00000315684 AMIGO3Q86WK7 504 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 WDR48Q8TAF3 677 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 ARHGEF2Q92974 986 aaKnown RBP9.52□□□□□ -0.89
CTC1-201ENST00000315684 SRPK1Q96SB4 655 aaKnown RBP9.52□□□□□ -0.89
CTC1-201ENST00000315684 CHST12Q9NRB3 414 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 DDX43Q9NXZ2 648 aaKnown RBP9.52□□□□□ -0.89
CTC1-201ENST00000315684 SLC12A8A0AV02 714 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 SNX2O60749 519 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 NPTX2P47972 431 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 PPP2R5EQ16537 467 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 SLC39A12Q504Y0 691 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 MPZL3Q6UWV2 235 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 CCDC121Q6ZUS5 278 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 PROM2Q8N271 834 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 CAPN10Q9HC96 672 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 ASS1P00966 412 aaKnown RBP9.52□□□□□ -0.89
CTC1-201ENST00000315684 MSH2P43246 934 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 RCAN1P53805 252 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 RWDD2BP57060 319 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 ITGA7Q13683 1181 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 SH2D4BQ5SQS7 431 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 XRRA1Q6P2D8 792 aa9.52□□□□□ -0.89
CTC1-201ENST00000315684 RPRD1AQ96P16 312 aaPredicted RBP9.52□□□□□ -0.89
CTC1-201ENST00000315684 MRPL17Q9NRX2 175 aaKnown RBP9.52□□□□□ -0.89
CTC1-201ENST00000315684 ZRANB2O95218 330 aaKnown RBP eCLIP9.51□□□□□ -0.89
CTC1-201ENST00000315684 ZNF280DQ6N043 979 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 TRIM67Q6ZTA4 783 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 C16orf59Q7L2K0 433 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 ATPAF2Q8N5M1 289 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 NFKBIZQ9BYH8 718 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 ANKEF1Q9NU02 776 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 HDAC6Q9UBN7 1215 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 KIAA1210Q9ULL0 1709 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 E2F8A0AVK6 867 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 EEF2KO00418 725 aaKnown RBP9.51□□□□□ -0.89
CTC1-201ENST00000315684 CA4P22748 312 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 CCL14Q16627 93 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 TSC1Q92574 1164 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 MED15Q96RN5 788 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 TRPM5Q9NZQ8 1165 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 A8MX80 341 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 LZTS3O60299 673 aaPredicted RBP9.51□□□□□ -0.89
CTC1-201ENST00000315684 FGBP02675 491 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 RPA1P27694 616 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 ATP1A2P50993 1020 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 SCNN1GP51170 649 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 VCPP55072 806 aaKnown RBP9.51□□□□□ -0.89
CTC1-201ENST00000315684 LMNB2Q03252 620 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 TROAPQ12815 778 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 GET4Q7L5D6 327 aaPredicted RBP9.51□□□□□ -0.89
CTC1-201ENST00000315684 NKX2-3Q8TAU0 364 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 ENOX1Q8TC92 643 aaKnown RBP9.51□□□□□ -0.89
CTC1-201ENST00000315684 GPR152Q8TDT2 470 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 EDEM1Q92611 657 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 RSAD1Q9HA92 442 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 IGSF3O75054 1194 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 PPFIA4O75335 1185 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 AP3M2P53677 418 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 FKBP1BP68106 108 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 PPP2R2DQ66LE6 453 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 ATP8B4Q8TF62 1192 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 TRIM9Q9C026 710 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 EPB41L5Q9HCM4 733 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 EHD2Q9NZN4 543 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 DAAM1Q9Y4D1 1078 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 IPPQ9Y573 584 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 PXDNLA1KZ92 1463 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 IFT172Q9UG01 1749 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.51□□□□□ -0.89
CTC1-201ENST00000315684 FGGP02679 453 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 CASP7P55210 303 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 ZBED6P86452 979 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 ZNF177Q13360 481 aaPredicted RBP9.51□□□□□ -0.89
CTC1-201ENST00000315684 CYP39A1Q9NYL5 469 aa9.51□□□□□ -0.89
CTC1-201ENST00000315684 F8W8V4 182 aa9.5□□□□□ -0.89
CTC1-201ENST00000315684 APOL1O14791 398 aa9.5□□□□□ -0.89
CTC1-201ENST00000315684 NCK2O43639 380 aa9.5□□□□□ -0.89
CTC1-201ENST00000315684 CIB2O75838 187 aa9.5□□□□□ -0.89
CTC1-201ENST00000315684 CXCL14O95715 111 aa9.5□□□□□ -0.89
CTC1-201ENST00000315684 KLK7P49862 253 aa9.5□□□□□ -0.89
CTC1-201ENST00000315684 TMPRSS15P98073 1019 aa9.5□□□□□ -0.89
CTC1-201ENST00000315684 OVOS1Q6IE37 1185 aa9.5□□□□□ -0.89
CTC1-201ENST00000315684 CBWD2Q8IUF1 395 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms