RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 ZBED6P86452 979 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 SGSM1Q2NKQ1 1148 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 GLB1LQ6UWU2 654 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 CNGA4Q8IV77 575 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 IL23AQ9NPF7 189 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 SLC38A7Q9NVC3 462 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 PCDH10Q9P2E7 1040 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 DNAJC12Q9UKB3 198 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 AJAP1Q9UKB5 411 aaPredicted RBP17.35■□□□□ 0.37
TUBB3-201ENST00000315491 LRFN2Q9ULH4 789 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 INPP5FQ9Y2H2 1132 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.35■□□□□ 0.37
TUBB3-201ENST00000315491 ABHD14A-ACY1A0A1B0GW23 586 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 CTIFO43310 598 aaKnown RBP17.35■□□□□ 0.37
TUBB3-201ENST00000315491 EVI5O60447 810 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 CLSTN1O94985 981 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 ASS1P00966 412 aaKnown RBP17.35■□□□□ 0.37
TUBB3-201ENST00000315491 FGFR1P11362 822 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 NOP14P78316 857 aaKnown RBP17.35■□□□□ 0.37
TUBB3-201ENST00000315491 SOX4Q06945 474 aaPredicted RBP17.35■□□□□ 0.37
TUBB3-201ENST00000315491 ARID5BQ14865 1188 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 CLLU1OSQ5K130 101 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 SPOPLQ6IQ16 392 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 TC2NQ8N9U0 490 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 ZNF397Q8NF99 534 aaPredicted RBP17.35■□□□□ 0.37
TUBB3-201ENST00000315491 HELQQ8TDG4 1101 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 BAP1Q92560 729 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 BADQ92934 168 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 TATDN2Q93075 761 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 ELMO3Q96BJ8 720 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 NAA15Q9BXJ9 866 aaKnown RBP17.35■□□□□ 0.37
TUBB3-201ENST00000315491 APOBEC3GQ9HC16 384 aaKnown RBP17.35■□□□□ 0.37
TUBB3-201ENST00000315491 UBE2TQ9NPD8 197 aaPredicted RBP17.35■□□□□ 0.37
TUBB3-201ENST00000315491 RNF216Q9NWF9 866 aaPredicted RBP17.35■□□□□ 0.37
TUBB3-201ENST00000315491 AGAP1Q9UPQ3 857 aa17.35■□□□□ 0.37
TUBB3-201ENST00000315491 POMCP01189 267 aa17.34■□□□□ 0.37
TUBB3-201ENST00000315491 ACRP10323 421 aa17.34■□□□□ 0.37
TUBB3-201ENST00000315491 ATICP31939 592 aa17.34■□□□□ 0.37
TUBB3-201ENST00000315491 GRIK3Q13003 919 aa17.34■□□□□ 0.37
TUBB3-201ENST00000315491 PPIGQ13427 754 aaKnown RBP eCLIP17.34■□□□□ 0.37
TUBB3-201ENST00000315491 ZNF699Q32M78 642 aa17.34■□□□□ 0.37
TUBB3-201ENST00000315491 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.34■□□□□ 0.37
TUBB3-201ENST00000315491 RRAGAQ7L523 313 aa17.34■□□□□ 0.37
TUBB3-201ENST00000315491 NPAS4Q8IUM7 802 aa17.34■□□□□ 0.37
TUBB3-201ENST00000315491 PPM1KQ8N3J5 372 aa17.34■□□□□ 0.37
TUBB3-201ENST00000315491 TAF4BQ92750 862 aa17.34■□□□□ 0.37
TUBB3-201ENST00000315491 XYLT2Q9H1B5 865 aa17.34■□□□□ 0.37
TUBB3-201ENST00000315491 FPGSQ05932 587 aa17.33■□□□□ 0.37
TUBB3-201ENST00000315491 RAPGEF1Q13905 1077 aa17.33■□□□□ 0.37
TUBB3-201ENST00000315491 NAB2Q15742 525 aa17.33■□□□□ 0.37
TUBB3-201ENST00000315491 C9orf57Q5W0N0 161 aa17.33■□□□□ 0.37
TUBB3-201ENST00000315491 PDXDC1Q6P996 788 aa17.33■□□□□ 0.37
TUBB3-201ENST00000315491 CRIPAKQ8N1N5 446 aa17.33■□□□□ 0.37
TUBB3-201ENST00000315491 URGCPQ8TCY9 931 aa17.33■□□□□ 0.37
TUBB3-201ENST00000315491 FAM81BQ96LP2 452 aa17.33■□□□□ 0.37
TUBB3-201ENST00000315491 SPAG5Q96R06 1193 aa17.33■□□□□ 0.37
TUBB3-201ENST00000315491 STK33Q9BYT3 514 aa17.33■□□□□ 0.37
TUBB3-201ENST00000315491 GOLGA2P5Q9HBQ8 144 aa17.33■□□□□ 0.37
TUBB3-201ENST00000315491 ABHD10Q9NUJ1 306 aa17.33■□□□□ 0.37
TUBB3-201ENST00000315491 NUB1Q9Y5A7 615 aa17.33■□□□□ 0.37
TUBB3-201ENST00000315491 ANO9A1A5B4 782 aa17.33■□□□□ 0.36
TUBB3-201ENST00000315491 LRRC53A6NM62 1247 aa17.33■□□□□ 0.36
TUBB3-201ENST00000315491 HOXA2O43364 376 aa17.33■□□□□ 0.36
TUBB3-201ENST00000315491 EFCAB14O75071 495 aa17.33■□□□□ 0.36
TUBB3-201ENST00000315491 STAU1O95793 577 aaKnown RBP17.33■□□□□ 0.36
TUBB3-201ENST00000315491 LRPAP1P30533 357 aa17.33■□□□□ 0.36
TUBB3-201ENST00000315491 GCNT1Q02742 428 aa17.33■□□□□ 0.36
TUBB3-201ENST00000315491 NOMO2Q5JPE7 1267 aa17.33■□□□□ 0.36
TUBB3-201ENST00000315491 LRRC52Q8N7C0 313 aa17.33■□□□□ 0.36
TUBB3-201ENST00000315491 OR8K1Q8NGG5 319 aa17.33■□□□□ 0.36
TUBB3-201ENST00000315491 KAT5Q92993 513 aa17.33■□□□□ 0.36
TUBB3-201ENST00000315491 HPDLQ96IR7 371 aa17.33■□□□□ 0.36
TUBB3-201ENST00000315491 VRTNQ9H8Y1 702 aa17.33■□□□□ 0.36
TUBB3-201ENST00000315491 PDCD11Q14690 1871 aaKnown RBP17.33■□□□□ 0.36
TUBB3-201ENST00000315491 PIRO00625 290 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 PPEF2O14830 753 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 BAIAP3O94812 1187 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 SYN1P17600 705 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 MFAP3P55082 362 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 JAM2P57087 298 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 DRAP1Q14919 205 aaPredicted RBP17.32■□□□□ 0.36
TUBB3-201ENST00000315491 ARHGAP44Q17R89 818 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 ENOSF1Q7L5Y1 443 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 LRRC8AQ8IWT6 810 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 ABI1Q8IZP0 508 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 KIAA1524Q8TCG1 905 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 TSC1Q92574 1164 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 DPF3Q92784 378 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 KREMEN1Q96MU8 473 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 PANX2Q96RD6 677 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 DNAJC7Q99615 494 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 NIF3L1Q9GZT8 377 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 NUCKS1Q9H1E3 243 aaKnown RBP17.32■□□□□ 0.36
TUBB3-201ENST00000315491 KANSL3Q9P2N6 904 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 MYO6Q9UM54 1294 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 TRIP11Q15643 1979 aa17.32■□□□□ 0.36
TUBB3-201ENST00000315491 AMHP03971 560 aa17.31■□□□□ 0.36
TUBB3-201ENST00000315491 TBXAS1P24557 533 aaPredicted RBP17.31■□□□□ 0.36
TUBB3-201ENST00000315491 GABPB1Q06547 395 aaPredicted RBP17.31■□□□□ 0.36
TUBB3-201ENST00000315491 MYO1EQ12965 1108 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms