RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 CENPCQ03188 943 aa19.63■□□□□ 0.73
CCDC43-201ENST00000315286 C2CD6Q53TS8 623 aa19.63■□□□□ 0.73
CCDC43-201ENST00000315286 MORN1Q5T089 497 aa19.63■□□□□ 0.73
CCDC43-201ENST00000315286 PASD1Q8IV76 773 aa19.63■□□□□ 0.73
CCDC43-201ENST00000315286 ZSWIM1Q9BR11 485 aa19.63■□□□□ 0.73
CCDC43-201ENST00000315286 PDZD7Q9H5P4 517 aa19.63■□□□□ 0.73
CCDC43-201ENST00000315286 ZCCHC17Q9NP64 241 aaKnown RBP19.63■□□□□ 0.73
CCDC43-201ENST00000315286 SLC5A4Q9NY91 659 aa19.63■□□□□ 0.73
CCDC43-201ENST00000315286 A0A0U1RQG5 324 aaPredicted RBP19.62■□□□□ 0.73
CCDC43-201ENST00000315286 CCDC188H7C350 402 aa19.62■□□□□ 0.73
CCDC43-201ENST00000315286 DYNC1LI2O43237 492 aaPredicted RBP19.62■□□□□ 0.73
CCDC43-201ENST00000315286 SART1O43290 800 aaKnown RBP19.62■□□□□ 0.73
CCDC43-201ENST00000315286 TNNC2P02585 160 aa19.62■□□□□ 0.73
CCDC43-201ENST00000315286 STAG3L1P0CL83 205 aa19.62■□□□□ 0.73
CCDC43-201ENST00000315286 ARF4P18085 180 aaPredicted RBP19.62■□□□□ 0.73
CCDC43-201ENST00000315286 RRM1P23921 792 aa19.62■□□□□ 0.73
CCDC43-201ENST00000315286 CARSP49589 748 aaKnown RBP19.62■□□□□ 0.73
CCDC43-201ENST00000315286 PEX5P50542 639 aa19.62■□□□□ 0.73
CCDC43-201ENST00000315286 ZNF157P51786 506 aaPredicted RBP19.62■□□□□ 0.73
CCDC43-201ENST00000315286 ZNF132P52740 706 aa19.62■□□□□ 0.73
CCDC43-201ENST00000315286 AADACL2Q6P093 401 aa19.62■□□□□ 0.73
CCDC43-201ENST00000315286 PHLDB2Q86SQ0 1253 aa19.62■□□□□ 0.73
CCDC43-201ENST00000315286 RASAL3Q86YV0 1011 aa19.62■□□□□ 0.73
CCDC43-201ENST00000315286 UBL4BQ8N7F7 174 aa19.62■□□□□ 0.73
CCDC43-201ENST00000315286 NLRP7Q8WX94 980 aa19.62■□□□□ 0.73
CCDC43-201ENST00000315286 CD101Q93033 1021 aa19.62■□□□□ 0.73
CCDC43-201ENST00000315286 ANKRD36BP1Q96IX9 119 aa19.62■□□□□ 0.73
CCDC43-201ENST00000315286 NIF3L1Q9GZT8 377 aa19.62■□□□□ 0.73
CCDC43-201ENST00000315286 VIPAS39Q9H9C1 493 aa19.62■□□□□ 0.73
CCDC43-201ENST00000315286 NR2E1Q9Y466 385 aa19.62■□□□□ 0.73
CCDC43-201ENST00000315286 ZNF236Q9UL36 1845 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 MEFVO15553 781 aaPredicted RBP19.61■□□□□ 0.73
CCDC43-201ENST00000315286 THAP12O43422 761 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 ZEB2O60315 1214 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 CD58P19256 250 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 NSFP46459 744 aaKnown RBP19.61■□□□□ 0.73
CCDC43-201ENST00000315286 MAP2K5Q13163 448 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 TRADDQ15628 312 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 KIAA0319LQ8IZA0 1049 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 XYLT2Q9H1B5 865 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 WNT8AQ9H1J5 351 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 AVENQ9NQS1 362 aaPredicted RBP19.61■□□□□ 0.73
CCDC43-201ENST00000315286 PRDM10Q9NQV6 1147 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 SETD4Q9NVD3 440 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 FLRT1Q9NZU1 646 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 HPCAL4Q9UM19 191 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 LACTBL1A8MY62 500 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 POLR3GO15318 223 aaPredicted RBP19.61■□□□□ 0.73
CCDC43-201ENST00000315286 IL18RAPO95256 599 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 MCF2P10911 925 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 NOMO3P69849 1222 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 LLGL2Q6P1M3 1020 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 TRIM72Q6ZMU5 477 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 SND1Q7KZF4 910 aaKnown RBP eCLIP19.61■□□□□ 0.73
CCDC43-201ENST00000315286 MON1BQ7L1V2 547 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 ZNF606Q8WXB4 792 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 CASKIN2Q8WXE0 1202 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 IFT81Q8WYA0 676 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 CISHQ9NSE2 258 aa19.61■□□□□ 0.73
CCDC43-201ENST00000315286 TRPM7Q96QT4 1865 aa19.6■□□□□ 0.73
CCDC43-201ENST00000315286 SPOPO43791 374 aa19.6■□□□□ 0.73
CCDC43-201ENST00000315286 NFICP08651 508 aa19.6■□□□□ 0.73
CCDC43-201ENST00000315286 WEE2P0C1S8 567 aa19.6■□□□□ 0.73
CCDC43-201ENST00000315286 EPHB4P54760 987 aa19.6■□□□□ 0.73
CCDC43-201ENST00000315286 TAF1CQ15572 869 aaPredicted RBP19.6■□□□□ 0.73
CCDC43-201ENST00000315286 ZNF699Q32M78 642 aa19.6■□□□□ 0.73
CCDC43-201ENST00000315286 ADAT2Q7Z6V5 191 aaKnown RBP19.6■□□□□ 0.73
CCDC43-201ENST00000315286 TMEM130Q8N3G9 435 aa19.6■□□□□ 0.73
CCDC43-201ENST00000315286 SCLT1Q96NL6 688 aa19.6■□□□□ 0.73
CCDC43-201ENST00000315286 TRIM7Q9C029 511 aa19.6■□□□□ 0.73
CCDC43-201ENST00000315286 NFU1Q9UMS0 254 aa19.6■□□□□ 0.73
CCDC43-201ENST00000315286 MYBL1P10243 752 aa19.6■□□□□ 0.73
CCDC43-201ENST00000315286 GPS2Q13227 327 aa19.6■□□□□ 0.73
CCDC43-201ENST00000315286 PPP1R13LQ8WUF5 828 aa19.6■□□□□ 0.73
CCDC43-201ENST00000315286 TRIM11Q96F44 468 aa19.6■□□□□ 0.73
CCDC43-201ENST00000315286 AMACRQ9UHK6 382 aa19.6■□□□□ 0.73
CCDC43-201ENST00000315286 ANAPC7Q9UJX3 599 aa19.6■□□□□ 0.73
CCDC43-201ENST00000315286 GNEQ9Y223 722 aaKnown RBP19.6■□□□□ 0.73
CCDC43-201ENST00000315286 MROH7Q68CQ1 1323 aa19.59■□□□□ 0.73
CCDC43-201ENST00000315286 A6NJR5 290 aa19.59■□□□□ 0.73
CCDC43-201ENST00000315286 ASPAP45381 313 aa19.59■□□□□ 0.73
CCDC43-201ENST00000315286 GABPB1Q06547 395 aaPredicted RBP19.59■□□□□ 0.73
CCDC43-201ENST00000315286 ZNF394Q53GI3 561 aa19.59■□□□□ 0.73
CCDC43-201ENST00000315286 EMBQ6PCB8 327 aa19.59■□□□□ 0.73
CCDC43-201ENST00000315286 SCARA5Q6ZMJ2 495 aa19.59■□□□□ 0.73
CCDC43-201ENST00000315286 C11orf70Q9BRQ4 267 aa19.59■□□□□ 0.73
CCDC43-201ENST00000315286 SIX4Q9UIU6 781 aa19.59■□□□□ 0.73
CCDC43-201ENST00000315286 PCDHA3Q9Y5H8 950 aa19.59■□□□□ 0.73
CCDC43-201ENST00000315286 MANSC4A6NHS7 340 aaPredicted RBP19.58■□□□□ 0.73
CCDC43-201ENST00000315286 TSPAN1O60635 241 aa19.58■□□□□ 0.73
CCDC43-201ENST00000315286 KRT19P08727 400 aa19.58■□□□□ 0.73
CCDC43-201ENST00000315286 CTNNA1P35221 906 aaKnown RBP19.58■□□□□ 0.73
CCDC43-201ENST00000315286 IRX5P78411 483 aaPredicted RBP19.58■□□□□ 0.73
CCDC43-201ENST00000315286 KCTD19Q17RG1 926 aaPredicted RBP19.58■□□□□ 0.73
CCDC43-201ENST00000315286 JADE1Q6IE81 842 aa19.58■□□□□ 0.73
CCDC43-201ENST00000315286 C1orf127Q8N9H9 656 aa19.58■□□□□ 0.73
CCDC43-201ENST00000315286 UBE2Q2Q8WVN8 375 aa19.58■□□□□ 0.73
CCDC43-201ENST00000315286 LENG1Q96BZ8 264 aaPredicted RBP19.58■□□□□ 0.73
CCDC43-201ENST00000315286 NAP1L3Q99457 506 aaPredicted RBP19.58■□□□□ 0.73
CCDC43-201ENST00000315286 ACBD3Q9H3P7 528 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms