RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 NT5C1B-RDH14C9J2C7 533 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 PMM2O15305 246 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 LPXNO60711 386 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 PHACTR2O75167 634 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 STAU1O95793 577 aaKnown RBP19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 ITGB3P05106 788 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 EEF1GP26641 437 aaKnown RBP19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 PBX3P40426 434 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 AARSP49588 968 aaKnown RBP eCLIP19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 BIRC3Q13489 604 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 ZACNQ401N2 412 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 TCERG1LQ5VWI1 586 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 KRT39Q6A163 491 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 RNF168Q8IYW5 571 aaPredicted RBP19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 CCDC150Q8NCX0 1101 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 APPL2Q8NEU8 664 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 OR5B17Q8NGF7 314 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 POF1BQ8WVV4 589 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 TAF4BQ92750 862 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 MRPL38Q96DV4 380 aaKnown RBP19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 EEF2KMTQ96G04 330 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 PAAF1Q9BRP4 392 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 HERC2P3Q9BVR0 1158 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 OXCT2Q9BYC2 517 aaPredicted RBP19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 IMPG2Q9BZV3 1241 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 GZF1Q9H116 711 aaPredicted RBP19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 CERS4Q9HA82 394 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 DSEQ9UL01 958 aa19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.3■□□□□ 0.68
SSSCA1-201ENST00000309328 P4HA2O15460 535 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 EFEMP2O95967 443 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 URODP06132 367 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 TPM2P07951 284 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 POLR2BP30876 1174 aaKnown RBP19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 ZNF165P49910 485 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 MXI1P50539 228 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 LILRA4P59901 499 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 TIGD5Q53EQ6 642 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 DCAF17Q5H9S7 520 aaPredicted RBP19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 KIAA1841Q6NSI8 718 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 C11orf57Q6ZUT1 292 aaPredicted RBP19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 TMEM173Q86WV6 379 aaPredicted RBP19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 TRIM59Q8IWR1 403 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 VPS52Q8N1B4 723 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 DEFB123Q8N688 67 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 SPATA18Q8TC71 538 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 SUSD3Q96L08 255 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 CNOT6LQ96LI5 555 aaKnown RBP19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 POP1Q99575 1024 aaKnown RBP19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 VRTNQ9H8Y1 702 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 AGAP1Q9UPQ3 857 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 IRAK3Q9Y616 596 aa19.29■□□□□ 0.68
SSSCA1-201ENST00000309328 GBF1Q92538 1859 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 TDRD15B5MCY1 1934 aaKnown RBP19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 BECN2A8MW95 431 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 SLC34A2O95436 690 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 C4BPAP04003 597 aaKnown RBP19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 KRT19P08727 400 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 CTSAP10619 480 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 P4HA1P13674 534 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 TPM4P67936 248 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 NCOA4Q13772 614 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 SMC1AQ14683 1233 aaKnown RBP19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 GRIN2CQ14957 1233 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 C15orf39Q6ZRI6 1047 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 SV2AQ7L0J3 742 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 PLEKHO2Q8TD55 490 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 GDPD5Q8WTR4 605 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 SLC35C1Q96A29 364 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 FAXDC2Q96IV6 333 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 MED15Q96RN5 788 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 TTPALQ9BTX7 342 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 ZBP1Q9H171 429 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 ALG13Q9NP73 1137 aaKnown RBP19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 ENTPD7Q9NQZ7 604 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 CHST7Q9NS84 486 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 GDAP2Q9NXN4 497 aa19.28■□□□□ 0.68
SSSCA1-201ENST00000309328 PTPRJQ12913 1337 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 KPNA7A9QM74 516 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 M0QZQ0 153 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 GRM6O15303 877 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 FAM163BP0C2L3 166 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 TRIM49P0CI25 452 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 TRIM49CP0CI26 452 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 ODC1P11926 461 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 GLUD2P49448 558 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 DLG4P78352 724 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 DSG1Q02413 1049 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 SGSM1Q2NKQ1 1148 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 TDRD10Q5VZ19 366 aaKnown RBP19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 LMBRD2Q68DH5 695 aaPredicted RBP19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 DSTYKQ6XUX3 929 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 TMC7Q7Z402 723 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 C3orf58Q8NDZ4 430 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 CXorf38Q8TB03 319 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 ZNF516Q92618 1163 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 HPDLQ96IR7 371 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 TCF25Q9BQ70 676 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms