RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 SPATA1Q5VX52 437 aa21.56■■□□□ 1.04
PDZRN3-202ENST00000308537 JADE1Q6IE81 842 aa21.56■■□□□ 1.04
PDZRN3-202ENST00000308537 GLIS3Q8NEA6 775 aa21.56■■□□□ 1.04
PDZRN3-202ENST00000308537 SLC7A14Q8TBB6 771 aa21.56■■□□□ 1.04
PDZRN3-202ENST00000308537 STAMQ92783 540 aa21.56■■□□□ 1.04
PDZRN3-202ENST00000308537 RPF1Q9H9Y2 349 aaKnown RBP21.56■■□□□ 1.04
PDZRN3-202ENST00000308537 KCNK12Q9HB15 430 aa21.56■■□□□ 1.04
PDZRN3-202ENST00000308537 TBC1D7Q9P0N9 293 aa21.56■■□□□ 1.04
PDZRN3-202ENST00000308537 ZDHHC9Q9Y397 364 aa21.56■■□□□ 1.04
PDZRN3-202ENST00000308537 HCN4Q9Y3Q4 1203 aa21.56■■□□□ 1.04
PDZRN3-202ENST00000308537 CUTAO60888 179 aa21.55■■□□□ 1.04
PDZRN3-202ENST00000308537 NTHL1P78549 312 aa21.55■■□□□ 1.04
PDZRN3-202ENST00000308537 UVSSAQ2YD98 709 aa21.55■■□□□ 1.04
PDZRN3-202ENST00000308537 L1TD1Q5T7N2 865 aaKnown RBP21.55■■□□□ 1.04
PDZRN3-202ENST00000308537 POTEHQ6S545 545 aa21.55■■□□□ 1.04
PDZRN3-202ENST00000308537 UBALD2Q8IYN6 164 aa21.55■■□□□ 1.04
PDZRN3-202ENST00000308537 ACSF2Q96CM8 615 aaPredicted RBP21.55■■□□□ 1.04
PDZRN3-202ENST00000308537 TSPAN18Q96SJ8 248 aa21.55■■□□□ 1.04
PDZRN3-202ENST00000308537 TNMDQ9H2S6 317 aa21.55■■□□□ 1.04
PDZRN3-202ENST00000308537 MRPL44Q9H9J2 332 aaKnown RBP21.55■■□□□ 1.04
PDZRN3-202ENST00000308537 FBXL5Q9UKA1 691 aa21.55■■□□□ 1.04
PDZRN3-202ENST00000308537 PCDHB8Q9UN66 801 aa21.55■■□□□ 1.04
PDZRN3-202ENST00000308537 NUB1Q9Y5A7 615 aa21.55■■□□□ 1.04
PDZRN3-202ENST00000308537 TCHHQ07283 1943 aa21.55■■□□□ 1.04
PDZRN3-202ENST00000308537 ANO9A1A5B4 782 aa21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 SPTLC1O15269 473 aa21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 VNN2O95498 520 aa21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 MCM4P33991 863 aa21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 POU5F1Q01860 360 aaKnown RBP21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 FOXD4L6Q3SYB3 417 aaPredicted RBP21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 ADALQ6DHV7 355 aa21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 CNNM4Q6P4Q7 775 aa21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 FOXD4L3Q6VB84 417 aaPredicted RBP21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 GRASPQ7Z6J2 395 aaPredicted RBP21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 CD302Q8IX05 232 aa21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 EFCAB13Q8IY85 973 aa21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 SPRYD3Q8NCJ5 442 aa21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 ZNF461Q8TAF7 563 aa21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 PBXIP1Q96AQ6 731 aa21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 TRIM9Q9C026 710 aa21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 AGO2Q9UKV8 859 aaKnown RBP21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 PCDHA7Q9UN72 937 aa21.54■■□□□ 1.04
PDZRN3-202ENST00000308537 ARHGEF37A1IGU5 675 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 PIRO00625 290 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 CCL16O15467 120 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 OAZ2O95190 189 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 SEC24AO95486 1093 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 HOXD13P35453 343 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 PLA2G5P39877 138 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 EHHADHQ08426 723 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 PPM1LQ5SGD2 360 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 LIN9Q5TKA1 542 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 SLFN12LQ6IEE8 588 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 RTL10Q7L3V2 364 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 FBXL6Q8N531 539 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 RSAD2Q8WXG1 361 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 HPS3Q969F9 1004 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 CHAMP1Q96JM3 812 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 MFSD14AQ96MC6 490 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 ASB7Q9H672 318 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 PANK4Q9NVE7 773 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 HCFC1R1Q9NWW0 138 aa21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 DNMT3BQ9UBC3 853 aaKnown RBP21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.53■■□□□ 1.04
PDZRN3-202ENST00000308537 ANHXE9PGG2 379 aa21.52■■□□□ 1.04
PDZRN3-202ENST00000308537 GCNT3O95395 438 aa21.52■■□□□ 1.04
PDZRN3-202ENST00000308537 LAMP2P13473 410 aa21.52■■□□□ 1.04
PDZRN3-202ENST00000308537 IDEP14735 1019 aa21.52■■□□□ 1.04
PDZRN3-202ENST00000308537 ATF2P15336 505 aa21.52■■□□□ 1.04
PDZRN3-202ENST00000308537 VCPP55072 806 aaKnown RBP21.52■■□□□ 1.04
PDZRN3-202ENST00000308537 DNM1Q05193 864 aaKnown RBP21.52■■□□□ 1.04
PDZRN3-202ENST00000308537 C9orf57Q5W0N0 161 aa21.52■■□□□ 1.04
PDZRN3-202ENST00000308537 TCEAL8Q8IYN2 117 aa21.52■■□□□ 1.04
PDZRN3-202ENST00000308537 BEST2Q8NFU1 509 aa21.52■■□□□ 1.04
PDZRN3-202ENST00000308537 PIDD1Q9HB75 910 aa21.52■■□□□ 1.04
PDZRN3-202ENST00000308537 IGSF9Q9P2J2 1179 aa21.52■■□□□ 1.04
PDZRN3-202ENST00000308537 RCOR1Q9UKL0 485 aa21.52■■□□□ 1.04
PDZRN3-202ENST00000308537 DERAQ9Y315 318 aa21.52■■□□□ 1.04
PDZRN3-202ENST00000308537 C2CD2Q9Y426 696 aa21.52■■□□□ 1.04
PDZRN3-202ENST00000308537 TIMM13Q9Y5L4 95 aaPredicted RBP21.52■■□□□ 1.04
PDZRN3-202ENST00000308537 GBP2P32456 591 aaPredicted RBP21.51■■□□□ 1.03
PDZRN3-202ENST00000308537 LILRA4P59901 499 aa21.51■■□□□ 1.03
PDZRN3-202ENST00000308537 TDGQ13569 410 aa21.51■■□□□ 1.03
PDZRN3-202ENST00000308537 IER5LQ5T953 404 aa21.51■■□□□ 1.03
PDZRN3-202ENST00000308537 RESP18Q5W5W9 173 aa21.51■■□□□ 1.03
PDZRN3-202ENST00000308537 SCARA3Q6AZY7 606 aa21.51■■□□□ 1.03
PDZRN3-202ENST00000308537 ATL3Q6DD88 541 aa21.51■■□□□ 1.03
PDZRN3-202ENST00000308537 GET4Q7L5D6 327 aaPredicted RBP21.51■■□□□ 1.03
PDZRN3-202ENST00000308537 ITFG1Q8TB96 612 aa21.51■■□□□ 1.03
PDZRN3-202ENST00000308537 KCNG4Q8TDN1 519 aa21.51■■□□□ 1.03
PDZRN3-202ENST00000308537 POMGNT1Q8WZA1 660 aa21.51■■□□□ 1.03
PDZRN3-202ENST00000308537 DHX58Q96C10 678 aa21.51■■□□□ 1.03
PDZRN3-202ENST00000308537 ACCSQ96QU6 501 aa21.51■■□□□ 1.03
PDZRN3-202ENST00000308537 CUEDC2Q9H467 287 aa21.51■■□□□ 1.03
PDZRN3-202ENST00000308537 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.51■■□□□ 1.03
PDZRN3-202ENST00000308537 DUSP12Q9UNI6 340 aa21.51■■□□□ 1.03
PDZRN3-202ENST00000308537 H7C4K7 107 aa21.5■■□□□ 1.03
PDZRN3-202ENST00000308537 NRG2O14511 850 aaPredicted RBP21.5■■□□□ 1.03
PDZRN3-202ENST00000308537 NARSO43776 548 aaKnown RBP21.5■■□□□ 1.03
PDZRN3-202ENST00000308537 PRPF6O94906 941 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms