RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 ANKRD36BP1Q96IX9 119 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 ACAP3Q96P50 834 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 CDX2Q99626 313 aaPredicted RBP7.49□□□□□ -1.21
PTCD2-201ENST00000308077 GDF15Q99988 308 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 SYT11Q9BT88 431 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 TRPV6Q9H1D0 765 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 DEF6Q9H4E7 631 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 ASB7Q9H672 318 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 AGO3Q9H9G7 860 aaKnown RBP7.49□□□□□ -1.21
PTCD2-201ENST00000308077 LZTFL1Q9NQ48 299 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 STARD7Q9NQZ5 370 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 SIX4Q9UIU6 781 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 NUB1Q9Y5A7 615 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 ZNF318Q5VUA4 2279 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 CHD6Q8TD26 2715 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 DNAH12Q6ZR08 3092 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 A0A087X0T9 212 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 A0A0U1RQG5 324 aaPredicted RBP7.49□□□□□ -1.21
PTCD2-201ENST00000308077 KBTBD13C9JR72 458 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 AKR1B10O60218 316 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 PHACTR2O75167 634 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 RPS6KA5O75582 802 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 ASS1P00966 412 aaKnown RBP7.49□□□□□ -1.21
PTCD2-201ENST00000308077 TNNC2P02585 160 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 FAM228BP0C875 321 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 CCL5P13501 91 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 TNNT1P13805 278 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 GUCY2FP51841 1108 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 ST3GAL2Q16842 350 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 WDR44Q5JSH3 913 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 FBXO47Q5MNV8 452 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 ZNF618Q5T7W0 954 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 TRAF7Q6Q0C0 670 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 ALKAL1Q6UXT8 129 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 FAM71AQ8IYT1 594 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 LNX1Q8TBB1 728 aaPredicted RBP7.49□□□□□ -1.21
PTCD2-201ENST00000308077 ZMAT2Q96NC0 199 aaKnown RBP7.49□□□□□ -1.21
PTCD2-201ENST00000308077 DEFB118Q96PH6 123 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 CCDC94Q9BW85 323 aaPredicted RBP7.49□□□□□ -1.21
PTCD2-201ENST00000308077 IRX2Q9BZI1 471 aaPredicted RBP7.49□□□□□ -1.21
PTCD2-201ENST00000308077 LACRTQ9GZZ8 138 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 XYLT2Q9H1B5 865 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 RNF39Q9H2S5 420 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 EPHX3Q9H6B9 360 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 ACP6Q9NPH0 428 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 C1orf112Q9NSG2 853 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 RNF19AQ9NV58 838 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 TRIM10Q9UDY6 481 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 ADAMTS1Q9UHI8 967 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 NENFQ9UMX5 172 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 ST3GAL5Q9UNP4 418 aa7.49□□□□□ -1.21
PTCD2-201ENST00000308077 R3HCC1Q9Y3T6 440 aaKnown RBP7.49□□□□□ -1.21
PTCD2-201ENST00000308077 BZW2Q9Y6E2 419 aaKnown RBP7.49□□□□□ -1.21
PTCD2-201ENST00000308077 ARVCFO00192 962 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 DNM1LO00429 736 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 DDX3XO00571 662 aaKnown RBP eCLIP7.48□□□□□ -1.21
PTCD2-201ENST00000308077 RECQL4O94761 1208 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 SGPL1O95470 568 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 RPLP2P05387 115 aaKnown RBP7.48□□□□□ -1.21
PTCD2-201ENST00000308077 GHRP10912 638 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 ACO1P21399 889 aaKnown RBP7.48□□□□□ -1.21
PTCD2-201ENST00000308077 AKAP5P24588 427 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 CD52P31358 61 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 VAV2P52735 878 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 KRT83P78385 493 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 CUL2Q13617 745 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 LPIN1Q14693 890 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 TMEM132DQ14C87 1099 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 SLC18A3Q16572 532 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 FAM26DQ5JW98 314 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 APBB1IPQ7Z5R6 666 aaPredicted RBP7.48□□□□□ -1.21
PTCD2-201ENST00000308077 DNAAF5Q86Y56 855 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 UBR7Q8N806 425 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 SLC30A5Q8TAD4 765 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 SLC20A1Q8WUM9 679 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.48□□□□□ -1.21
PTCD2-201ENST00000308077 APOL6Q9BWW8 343 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 TRIM6Q9C030 488 aaPredicted RBP7.48□□□□□ -1.21
PTCD2-201ENST00000308077 RNF208Q9H0X6 261 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 ERVK-5Q9HDB9 667 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 OGDHLQ9ULD0 1010 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 NOD1Q9Y239 953 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 C2CD2Q9Y426 696 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 IPPQ9Y573 584 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 PCDHA13Q9Y5I0 950 aa7.48□□□□□ -1.21
PTCD2-201ENST00000308077 GOLGA6L9A6NEM1 432 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 CYP26A1O43174 497 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 MGEA5O60502 916 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 CALCAP01258 141 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 ITGB3P05106 788 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 CKBP12277 381 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 USP8P40818 1118 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 CDK7P50613 346 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 NFX1Q12986 1120 aaKnown RBP7.47□□□□□ -1.21
PTCD2-201ENST00000308077 SPA17Q15506 151 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 DNTTIP2Q5QJE6 756 aaKnown RBP7.47□□□□□ -1.21
PTCD2-201ENST00000308077 TWF2Q6IBS0 349 aaKnown RBP7.47□□□□□ -1.21
PTCD2-201ENST00000308077 ENOSF1Q7L5Y1 443 aa7.47□□□□□ -1.21
PTCD2-201ENST00000308077 NOP9Q86U38 636 aaKnown RBP7.47□□□□□ -1.21
PTCD2-201ENST00000308077 SLC47A2Q86VL8 602 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms