RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 GPR161Q8N6U8 529 aaKnown RBP12.74□□□□□ -0.37
TRIM40-205ENST00000307859 TRIB2Q92519 343 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 CPB2Q96IY4 423 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 SCLT1Q96NL6 688 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 IMPG2Q9BZV3 1241 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 ARHGAP39Q9C0H5 1083 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 ACP6Q9NPH0 428 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 SRRDQ9UH36 339 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 FRMPD3Q5JV73 1810 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 UMODL1Q5DID0 1318 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 SCN1AP35498 2009 aa12.74□□□□□ -0.37
TRIM40-205ENST00000307859 KPNA6O60684 536 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 FTCDO95954 541 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 CST3P01034 146 aaPredicted RBP12.73□□□□□ -0.37
TRIM40-205ENST00000307859 TNNC2P02585 160 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 FTLP02792 175 aaPredicted RBP12.73□□□□□ -0.37
TRIM40-205ENST00000307859 MYL3P08590 195 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 TMEM191BP0C7N4 346 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 STAG3L1P0CL83 205 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 CYP2C9P11712 490 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 NOP2P46087 812 aaKnown RBP12.73□□□□□ -0.37
TRIM40-205ENST00000307859 OSTNP61366 133 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 NKX3-2P78367 333 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 PURAQ00577 322 aaKnown RBP12.73□□□□□ -0.37
TRIM40-205ENST00000307859 BEX3Q00994 111 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 PCBP1Q15365 356 aaKnown RBP eCLIP12.73□□□□□ -0.37
TRIM40-205ENST00000307859 TAF3Q5VWG9 929 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 SCARA3Q6AZY7 606 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 RUFY4Q6ZNE9 571 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 Q7L0L9 218 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 MTERF4Q7Z6M4 381 aaKnown RBP12.73□□□□□ -0.37
TRIM40-205ENST00000307859 RHOT2Q8IXI1 618 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 COG1Q8WTW3 980 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 ARHGEF26Q96DR7 871 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 FAM212AQ96EL1 285 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 ANKRD36BP1Q96IX9 119 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 CALR3Q96L12 384 aaKnown RBP12.73□□□□□ -0.37
TRIM40-205ENST00000307859 MMS19Q96T76 1030 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 GCOM2Q9BZD3 368 aaPredicted RBP12.73□□□□□ -0.37
TRIM40-205ENST00000307859 THAP2Q9H0W7 228 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 UPF3AQ9H1J1 476 aaKnown RBP12.73□□□□□ -0.37
TRIM40-205ENST00000307859 ASB7Q9H672 318 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 GABRQQ9UN88 632 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 PCDHB2Q9Y5E7 798 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 PDE2AO00408 941 aaPredicted RBP12.73□□□□□ -0.37
TRIM40-205ENST00000307859 CES2O00748 559 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 ZSCAN20P17040 1043 aaPredicted RBP12.73□□□□□ -0.37
TRIM40-205ENST00000307859 ABCB4P21439 1286 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 ZNF132P52740 706 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 GJA9P57773 515 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 MYL6P60660 151 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 TFAMQ00059 246 aaKnown RBP12.73□□□□□ -0.37
TRIM40-205ENST00000307859 ITIH3Q06033 890 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 KIZQ2M2Z5 673 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 SGSM1Q2NKQ1 1148 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 DCAF4L1Q3SXM0 396 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 MFSD14CQ5VZR4 134 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 FBXO38Q6PIJ6 1188 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 SYCE1Q8N0S2 351 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 SLC35G2Q8TBE7 412 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 CAPZA3Q96KX2 299 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 NIF3L1Q9GZT8 377 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 FAM49AQ9H0Q0 323 aaPredicted RBP12.73□□□□□ -0.37
TRIM40-205ENST00000307859 RNF208Q9H0X6 261 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 XYLT2Q9H1B5 865 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 ABCB6Q9NP58 842 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 RNF14Q9UBS8 474 aa12.73□□□□□ -0.37
TRIM40-205ENST00000307859 LACTBL1A8MY62 500 aa12.72□□□□□ -0.37
TRIM40-205ENST00000307859 MTA2O94776 668 aa12.72□□□□□ -0.37
TRIM40-205ENST00000307859 NFICP08651 508 aa12.72□□□□□ -0.37
TRIM40-205ENST00000307859 DARSP14868 501 aaKnown RBP12.72□□□□□ -0.37
TRIM40-205ENST00000307859 GRM5P41594 1212 aa12.72□□□□□ -0.37
TRIM40-205ENST00000307859 FLT3LGP49771 235 aa12.72□□□□□ -0.37
TRIM40-205ENST00000307859 CLEC16AQ2KHT3 1053 aa12.72□□□□□ -0.37
TRIM40-205ENST00000307859 SLC10A6Q3KNW5 377 aa12.72□□□□□ -0.37
TRIM40-205ENST00000307859 PDCL2Q8N4E4 241 aa12.72□□□□□ -0.37
TRIM40-205ENST00000307859 NOA1Q8NC60 698 aaKnown RBP12.72□□□□□ -0.37
TRIM40-205ENST00000307859 MSANTD4Q8NCY6 345 aa12.72□□□□□ -0.37
TRIM40-205ENST00000307859 TAF4BQ92750 862 aa12.72□□□□□ -0.37
TRIM40-205ENST00000307859 FAXDC2Q96IV6 333 aa12.72□□□□□ -0.37
TRIM40-205ENST00000307859 ADPGKQ9BRR6 497 aa12.72□□□□□ -0.37
TRIM40-205ENST00000307859 OSGEPQ9NPF4 335 aa12.72□□□□□ -0.37
TRIM40-205ENST00000307859 PCDHB4Q9Y5E5 795 aa12.72□□□□□ -0.37
TRIM40-205ENST00000307859 MROH7Q68CQ1 1323 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 MYADML2A6NDP7 307 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 TREHO43280 583 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 BUB1BO60566 1050 aaPredicted RBP12.71□□□□□ -0.37
TRIM40-205ENST00000307859 KIF4AO95239 1232 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 UNGP13051 313 aaPredicted RBP12.71□□□□□ -0.37
TRIM40-205ENST00000307859 HOXA11P31270 313 aaPredicted RBP12.71□□□□□ -0.37
TRIM40-205ENST00000307859 GPC5P78333 572 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 TRPC3Q13507 836 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 JADE1Q6IE81 842 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 ACAD10Q6JQN1 1059 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 TMEM270Q6UE05 265 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 APBB1IPQ7Z5R6 666 aaPredicted RBP12.71□□□□□ -0.37
TRIM40-205ENST00000307859 NT5DC3Q86UY8 548 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 C1orf127Q8N9H9 656 aa12.71□□□□□ -0.37
TRIM40-205ENST00000307859 RBBP8NLQ8NC74 664 aaPredicted RBP12.71□□□□□ -0.37
TRIM40-205ENST00000307859 CXorf38Q8TB03 319 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms