RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 CNTNAP4Q9C0A0 1308 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 ADAMTS2O95450 1211 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 RFX4Q33E94 735 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 FAM83BQ5T0W9 1011 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 JADE1Q6IE81 842 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 FAM83AQ86UY5 434 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 RNF169Q8NCN4 708 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 OSBPL8Q9BZF1 889 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 MTIF3Q9H2K0 278 aaKnown RBP4.22□□□□□ -1.73
USH2A-201ENST00000307340 LIMA1Q9UHB6 759 aaKnown RBP4.22□□□□□ -1.73
USH2A-201ENST00000307340 RRN3P2A6NIE6 340 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 HUS1O60921 280 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 TGDSO95455 350 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 VCLP18206 1134 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 NKX1-1Q15270 411 aaPredicted RBP4.22□□□□□ -1.73
USH2A-201ENST00000307340 NAPEPLDQ6IQ20 393 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 SP8Q8IXZ3 490 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 PHF11Q9UIL8 331 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 SNX5Q9Y5X3 404 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 MROH7Q68CQ1 1323 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 OPHN1O60890 802 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 SOX5P35711 763 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 GRM4Q14833 912 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 DCAF6Q58WW2 860 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 TRIML2Q8N7C3 387 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 LEMD2Q8NC56 503 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 GLG1Q92896 1179 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 PHACTR3Q96KR7 559 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 TRIM9Q9C026 710 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 EPB41L5Q9HCM4 733 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 TMEM45AQ9NWC5 275 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 SNAP91O60641 907 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 ALDH1A3P47895 512 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 SKOR1P84550 965 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 TRIP4Q15650 581 aaPredicted RBP4.22□□□□□ -1.73
USH2A-201ENST00000307340 IER5Q5VY09 327 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 SDE2Q6IQ49 451 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 SYT2Q8N9I0 419 aaPredicted RBP4.22□□□□□ -1.73
USH2A-201ENST00000307340 MINDY2Q8NBR6 621 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 ANKS1AQ92625 1134 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 APOL4Q9BPW4 351 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 PCDH10Q9P2E7 1040 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 FAM237AA0A1B0GTK4 181 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 MED24O75448 989 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 IFNGR2P38484 337 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 PRELPP51888 382 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 URGCPQ8TCY9 931 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 PGM2Q96G03 612 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 TFCP2L1Q9NZI6 479 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.21□□□□□ -1.73
USH2A-201ENST00000307340 CREB3O43889 395 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 GHRP10912 638 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 ELAVL2Q12926 359 aaKnown RBP4.21□□□□□ -1.73
USH2A-201ENST00000307340 A1CFQ9NQ94 594 aaKnown RBP4.21□□□□□ -1.73
USH2A-201ENST00000307340 APOEP02649 317 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 VAMP7P51809 220 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 PLD1Q13393 1074 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 CCDC137Q6PK04 289 aaKnown RBP4.21□□□□□ -1.73
USH2A-201ENST00000307340 ZNF496Q96IT1 587 aaPredicted RBP4.21□□□□□ -1.73
USH2A-201ENST00000307340 VPS11Q9H270 941 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 ATP6V1HQ9UI12 483 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 G3BP2Q9UN86 482 aaKnown RBP4.21□□□□□ -1.73
USH2A-201ENST00000307340 SESN1Q9Y6P5 492 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 PIK3CDO00329 1044 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 RPN2P04844 631 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 TGM2P21980 687 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 GUCY1A3Q02108 690 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 ZNF667Q5HYK9 610 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 LRRC38Q5VT99 294 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 EXD1Q8NHP7 514 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 AGR3Q8TD06 166 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 PAGR1Q9BTK6 254 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 SLC9A2Q9UBY0 812 aa4.21□□□□□ -1.73
USH2A-201ENST00000307340 DBNLQ9UJU6 430 aaKnown RBP4.21□□□□□ -1.73
USH2A-201ENST00000307340 COL23A1Q86Y22 540 aaPredicted RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 BLOC1S5Q8TDH9 187 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 ABTB1Q969K4 478 aaPredicted RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 FAM163AQ96GL9 167 aaPredicted RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 RXFP1Q9HBX9 757 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 RARGP13631 454 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 RAB27AP51159 221 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 SF3B3Q15393 1217 aaKnown RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 PAPD7Q5XG87 772 aaKnown RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 GPRASP2Q96D09 838 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 MASTLQ96GX5 879 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 CXorf56Q9H5V9 222 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 COPEO14579 308 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 ANXA6P08133 673 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 RBP1P09455 135 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 HAND2P61296 217 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 IFT88Q13099 833 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 TTLL12Q14166 644 aaPredicted RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 C4orf50Q6ZRC1 276 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 PEX5LQ8IYB4 626 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 SRBD1Q8N5C6 995 aaKnown RBP4.21□□□□□ -1.74
USH2A-201ENST00000307340 ARL8AQ96BM9 186 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 GMCL1Q96IK5 515 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 STK32BQ9NY57 414 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 GTF3C4Q9UKN8 822 aa4.21□□□□□ -1.74
USH2A-201ENST00000307340 CFAP99D6REC4 459 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms