RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 BEST2Q8NFU1 509 aa18.81■□□□□ 0.6
KRT28-201ENST00000306658 KIF18AQ8NI77 898 aa18.81■□□□□ 0.6
KRT28-201ENST00000306658 CAGE1Q8TC20 777 aa18.81■□□□□ 0.6
KRT28-201ENST00000306658 ATRIPQ8WXE1 791 aa18.81■□□□□ 0.6
KRT28-201ENST00000306658 AGPAT1Q99943 283 aa18.81■□□□□ 0.6
KRT28-201ENST00000306658 SYT11Q9BT88 431 aa18.81■□□□□ 0.6
KRT28-201ENST00000306658 FAM105AQ9NUU6 356 aa18.81■□□□□ 0.6
KRT28-201ENST00000306658 MYO1AQ9UBC5 1043 aa18.81■□□□□ 0.6
KRT28-201ENST00000306658 NAGPAQ9UK23 515 aa18.81■□□□□ 0.6
KRT28-201ENST00000306658 TRIP11Q15643 1979 aa18.81■□□□□ 0.6
KRT28-201ENST00000306658 CEP350Q5VT06 3117 aa18.8■□□□□ 0.6
KRT28-201ENST00000306658 SGPL1O95470 568 aa18.8■□□□□ 0.6
KRT28-201ENST00000306658 GNG11P61952 73 aa18.8■□□□□ 0.6
KRT28-201ENST00000306658 ZBTB6Q15916 424 aa18.8■□□□□ 0.6
KRT28-201ENST00000306658 ZNF667Q5HYK9 610 aa18.8■□□□□ 0.6
KRT28-201ENST00000306658 SCARA3Q6AZY7 606 aa18.8■□□□□ 0.6
KRT28-201ENST00000306658 FBXO46Q6PJ61 603 aaPredicted RBP18.8■□□□□ 0.6
KRT28-201ENST00000306658 GLYCTKQ8IVS8 523 aa18.8■□□□□ 0.6
KRT28-201ENST00000306658 SLC30A5Q8TAD4 765 aa18.8■□□□□ 0.6
KRT28-201ENST00000306658 EPS8L1Q8TE68 723 aa18.8■□□□□ 0.6
KRT28-201ENST00000306658 ZNF592Q92610 1267 aa18.8■□□□□ 0.6
KRT28-201ENST00000306658 UBQLN1Q9UMX0 589 aaKnown RBP18.8■□□□□ 0.6
KRT28-201ENST00000306658 GUCA1BQ9UMX6 200 aa18.8■□□□□ 0.6
KRT28-201ENST00000306658 AGAP1Q9UPQ3 857 aa18.8■□□□□ 0.6
KRT28-201ENST00000306658 PCDHB4Q9Y5E5 795 aa18.8■□□□□ 0.6
KRT28-201ENST00000306658 UMODL1Q5DID0 1318 aa18.8■□□□□ 0.6
KRT28-201ENST00000306658 DDX3XO00571 662 aaKnown RBP eCLIP18.79■□□□□ 0.6
KRT28-201ENST00000306658 PJA2O43164 708 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 P4HA1P13674 534 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 KCNE1P15382 129 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 CYP11B1P15538 503 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 ACO1P21399 889 aaKnown RBP18.79■□□□□ 0.6
KRT28-201ENST00000306658 POLR2BP30876 1174 aaKnown RBP18.79■□□□□ 0.6
KRT28-201ENST00000306658 RAB27AP51159 221 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 YWHAEP62258 255 aaKnown RBP18.79■□□□□ 0.6
KRT28-201ENST00000306658 PKN2Q16513 984 aaKnown RBP18.79■□□□□ 0.6
KRT28-201ENST00000306658 WDR72Q3MJ13 1102 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 XKR4Q5GH76 650 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 SYT10Q6XYQ8 523 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 SLC47A2Q86VL8 602 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 CXorf38Q8TB03 319 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 ZMAT2Q96NC0 199 aaKnown RBP18.79■□□□□ 0.6
KRT28-201ENST00000306658 TRAIPQ9BWF2 469 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 LACRTQ9GZZ8 138 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 RNF39Q9H2S5 420 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 VRTNQ9H8Y1 702 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 CNTN6Q9UQ52 1028 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 SMIM28A0A1B0GU29 152 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 RCCD1A6NED2 376 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 STAU1O95793 577 aaKnown RBP18.79■□□□□ 0.6
KRT28-201ENST00000306658 ITGA4P13612 1032 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 MYO1EQ12965 1108 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 BFSP2Q13515 415 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 FAM126BQ8IXS8 530 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 U2AF1L4Q8WU68 220 aaKnown RBP18.79■□□□□ 0.6
KRT28-201ENST00000306658 HPDLQ96IR7 371 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 SEPT11Q9NVA2 429 aaKnown RBP18.79■□□□□ 0.6
KRT28-201ENST00000306658 KLK14Q9P0G3 267 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 NXF1Q9UBU9 619 aaKnown RBP18.79■□□□□ 0.6
KRT28-201ENST00000306658 DNAI1Q9UI46 699 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 NOCTQ9UK39 431 aaKnown RBP18.79■□□□□ 0.6
KRT28-201ENST00000306658 PAXBP1Q9Y5B6 917 aa18.79■□□□□ 0.6
KRT28-201ENST00000306658 ABL1P00519 1130 aa18.78■□□□□ 0.6
KRT28-201ENST00000306658 CD4P01730 458 aa18.78■□□□□ 0.6
KRT28-201ENST00000306658 TFRCP02786 760 aaKnown RBP18.78■□□□□ 0.6
KRT28-201ENST00000306658 HSPA8P11142 646 aaKnown RBP18.78■□□□□ 0.6
KRT28-201ENST00000306658 TMEM270Q6UE05 265 aa18.78■□□□□ 0.6
KRT28-201ENST00000306658 NOP9Q86U38 636 aaKnown RBP18.78■□□□□ 0.6
KRT28-201ENST00000306658 ZNF677Q86XU0 584 aa18.78■□□□□ 0.6
KRT28-201ENST00000306658 RPUSD2Q8IZ73 545 aaKnown RBP18.78■□□□□ 0.6
KRT28-201ENST00000306658 LNX1Q8TBB1 728 aaPredicted RBP18.78■□□□□ 0.6
KRT28-201ENST00000306658 ZNF333Q96JL9 665 aa18.78■□□□□ 0.6
KRT28-201ENST00000306658 CRISPLD2Q9H0B8 497 aa18.78■□□□□ 0.6
KRT28-201ENST00000306658 TFR2Q9UP52 801 aa18.78■□□□□ 0.6
KRT28-201ENST00000306658 ATP8B3O60423 1300 aa18.77■□□□□ 0.6
KRT28-201ENST00000306658 ZNF623O75123 536 aa18.77■□□□□ 0.6
KRT28-201ENST00000306658 SKIP12755 728 aa18.77■□□□□ 0.6
KRT28-201ENST00000306658 ASPAP45381 313 aa18.77■□□□□ 0.6
KRT28-201ENST00000306658 CDR2Q01850 454 aa18.77■□□□□ 0.6
KRT28-201ENST00000306658 GLRA4Q5JXX5 417 aa18.77■□□□□ 0.6
KRT28-201ENST00000306658 MRPL10Q7Z7H8 261 aaKnown RBP18.77■□□□□ 0.6
KRT28-201ENST00000306658 SLC20A1Q8WUM9 679 aa18.77■□□□□ 0.6
KRT28-201ENST00000306658 OSBPL7Q9BZF2 842 aa18.77■□□□□ 0.6
KRT28-201ENST00000306658 IRX2Q9BZI1 471 aaPredicted RBP18.77■□□□□ 0.6
KRT28-201ENST00000306658 CXCL16Q9H2A7 254 aa18.77■□□□□ 0.6
KRT28-201ENST00000306658 CISHQ9NSE2 258 aa18.77■□□□□ 0.6
KRT28-201ENST00000306658 TRIM10Q9UDY6 481 aa18.77■□□□□ 0.6
KRT28-201ENST00000306658 INTUQ9ULD6 942 aa18.77■□□□□ 0.6
KRT28-201ENST00000306658 NENFQ9UMX5 172 aa18.77■□□□□ 0.6
KRT28-201ENST00000306658 TLR3O15455 904 aaKnown RBP18.76■□□□□ 0.59
KRT28-201ENST00000306658 H2AFZP0C0S5 128 aa18.76■□□□□ 0.59
KRT28-201ENST00000306658 SELPP16109 830 aa18.76■□□□□ 0.59
KRT28-201ENST00000306658 CYP3A5P20815 502 aa18.76■□□□□ 0.59
KRT28-201ENST00000306658 GUCY2FP51841 1108 aa18.76■□□□□ 0.59
KRT28-201ENST00000306658 DSC3Q14574 896 aa18.76■□□□□ 0.59
KRT28-201ENST00000306658 ZNF569Q5MCW4 686 aa18.76■□□□□ 0.59
KRT28-201ENST00000306658 TRAF7Q6Q0C0 670 aa18.76■□□□□ 0.59
KRT28-201ENST00000306658 H2AFVQ71UI9 128 aa18.76■□□□□ 0.59
KRT28-201ENST00000306658 UBR7Q8N806 425 aa18.76■□□□□ 0.59
KRT28-201ENST00000306658 RBBP8NLQ8NC74 664 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms