RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 MRPL11Q9Y3B7 192 aaKnown RBP5.81□□□□□ -1.48
VPS50-202ENST00000305866 CLGNO14967 610 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 CLIC2O15247 247 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 MAFGO15525 162 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 KIAA0754O94854 1291 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 DLDP09622 509 aaKnown RBP5.8□□□□□ -1.48
VPS50-202ENST00000305866 PLS3P13797 630 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 SP100P23497 879 aaPredicted RBP5.8□□□□□ -1.48
VPS50-202ENST00000305866 CSRP3P50461 194 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 PDE6CP51160 858 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 ZNF132P52740 706 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 OCRLQ01968 901 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 TNIP1Q15025 636 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 LRRC14Q15048 493 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 C4orf50Q6ZRC1 276 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 ENOSF1Q7L5Y1 443 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 MAP4K3Q8IVH8 894 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 GALNT15Q8N3T1 639 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 AGBL3Q8NEM8 1001 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 LPAR1Q92633 364 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 NAF1Q96HR8 494 aaKnown RBP5.8□□□□□ -1.48
VPS50-202ENST00000305866 TBC1D10AQ9BXI6 508 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 MAK16Q9BXY0 300 aaKnown RBP5.8□□□□□ -1.48
VPS50-202ENST00000305866 TRIM6Q9C030 488 aaPredicted RBP5.8□□□□□ -1.48
VPS50-202ENST00000305866 KIAA1586Q9HCI6 787 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 GOPCQ9HD26 462 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 SLCO1B3Q9NPD5 702 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 PCDHB13Q9Y5F0 798 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 PTPRJQ12913 1337 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 IGKV6D-21A0A0A0MT36 114 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 CCDC169A6NNP5 214 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 IRF6O14896 467 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 STAM2O75886 525 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 VIMP08670 466 aaKnown RBP5.8□□□□□ -1.48
VPS50-202ENST00000305866 TRIM49P0CI25 452 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 TRIM49CP0CI26 452 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 CAP2P40123 477 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 STAT2P52630 851 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 GAD2Q05329 585 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 MSS51Q4VC12 460 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 TEX44Q53QW1 395 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 NUGGCQ68CJ6 796 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 PPP1R2P3Q6NXS1 205 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 LLGL2Q6P1M3 1020 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 DSTYKQ6XUX3 929 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 HOOK3Q86VS8 718 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 OR6Y1Q8NGX8 325 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 DCAKDQ8WVC6 231 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 WDR60Q8WVS4 1066 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 TBC1D31Q96DN5 1066 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 SPAG5Q96R06 1193 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 IWS1Q96ST2 819 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 RBM38Q9H0Z9 239 aaKnown RBP5.8□□□□□ -1.48
VPS50-202ENST00000305866 FAM124BQ9H5Z6 455 aaPredicted RBP5.8□□□□□ -1.48
VPS50-202ENST00000305866 UVRAGQ9P2Y5 699 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 LTBP3Q9NS15 1303 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 HMX2A2RU54 273 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 ITGB5P18084 799 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 KCNA3P22001 575 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 PTDSS1P48651 473 aaKnown RBP5.8□□□□□ -1.48
VPS50-202ENST00000305866 DNA2P51530 1060 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 TAS2R40P59535 323 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 GCNT1Q02742 428 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 PPP1R7Q15435 360 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 ACSBG2Q5FVE4 666 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 EFHC2Q5JST6 749 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 RNASEH2BQ5TBB1 312 aaKnown RBP5.8□□□□□ -1.48
VPS50-202ENST00000305866 RSBN1LQ6PCB5 846 aaPredicted RBP5.8□□□□□ -1.48
VPS50-202ENST00000305866 OTOAQ7RTW8 1153 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 FAM186BQ8IYM0 893 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 ZCCHC9Q8N567 271 aaKnown RBP5.8□□□□□ -1.48
VPS50-202ENST00000305866 RNF217Q8TC41 542 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 TEPSINQ96N21 525 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 INTS9Q9NV88 658 aaKnown RBP5.8□□□□□ -1.48
VPS50-202ENST00000305866 NOP53Q9NZM5 478 aaKnown RBP5.8□□□□□ -1.48
VPS50-202ENST00000305866 ZFATQ9P243 1243 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 RABGEF1Q9UJ41 708 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 ZBTB21Q9ULJ3 1066 aa5.8□□□□□ -1.48
VPS50-202ENST00000305866 UNCXA6NJT0 531 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 C2CD2LO14523 706 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 ATP9AO75110 1047 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 FTLP02792 175 aaPredicted RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 EDN1P05305 212 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 SSBP05455 408 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS50-202ENST00000305866 P4HBP07237 508 aaKnown RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 RPSAP08865 295 aaKnown RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 POLR2MP0CAP2 368 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 PECAM1P16284 738 aaPredicted RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 SFNP31947 248 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 L1CAMP32004 1257 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 RAP1GDS1P52306 607 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 MKRN3Q13064 507 aaKnown RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 PABPC4Q13310 644 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS50-202ENST00000305866 MSLNQ13421 630 aaPredicted RBP5.79□□□□□ -1.48
VPS50-202ENST00000305866 USP41Q3LFD5 358 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 WASHC2DQ5SRD0 308 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 THEMIS2Q5TEJ8 643 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 KRT27Q7Z3Y8 459 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 CHURC1Q8WUH1 139 aa5.79□□□□□ -1.48
VPS50-202ENST00000305866 TCP11Q8WWU5 503 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms