RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 FLRT1Q9NZU1 646 aa7□□□□□ -1.29
USP47-201ENST00000305481 CNOT8Q9UFF9 292 aaKnown RBP7□□□□□ -1.29
USP47-201ENST00000305481 POLR3GO15318 223 aaPredicted RBP7□□□□□ -1.29
USP47-201ENST00000305481 B4GALT4O60513 344 aa7□□□□□ -1.29
USP47-201ENST00000305481 FAM153BP0C7A2 387 aa7□□□□□ -1.29
USP47-201ENST00000305481 CXCL8P10145 99 aa7□□□□□ -1.29
USP47-201ENST00000305481 RRM1P23921 792 aa7□□□□□ -1.29
USP47-201ENST00000305481 TBXAS1P24557 533 aaPredicted RBP7□□□□□ -1.29
USP47-201ENST00000305481 MAPK4P31152 587 aa7□□□□□ -1.29
USP47-201ENST00000305481 TNNT3P45378 269 aaPredicted RBP7□□□□□ -1.29
USP47-201ENST00000305481 BPIFB4P59827 614 aa7□□□□□ -1.29
USP47-201ENST00000305481 TNNC1P63316 161 aa7□□□□□ -1.29
USP47-201ENST00000305481 TFAMQ00059 246 aaKnown RBP7□□□□□ -1.29
USP47-201ENST00000305481 POU5F1Q01860 360 aaKnown RBP7□□□□□ -1.29
USP47-201ENST00000305481 CENPCQ03188 943 aa7□□□□□ -1.29
USP47-201ENST00000305481 FAM153CQ494X1 144 aa7□□□□□ -1.29
USP47-201ENST00000305481 MON1BQ7L1V2 547 aa7□□□□□ -1.29
USP47-201ENST00000305481 PPP1R13LQ8WUF5 828 aa7□□□□□ -1.29
USP47-201ENST00000305481 ABHD16BQ9H3Z7 469 aa7□□□□□ -1.29
USP47-201ENST00000305481 ERVK-5Q9HDB9 667 aa7□□□□□ -1.29
USP47-201ENST00000305481 UVRAGQ9P2Y5 699 aa7□□□□□ -1.29
USP47-201ENST00000305481 FAM153AQ9UHL3 310 aa7□□□□□ -1.29
USP47-201ENST00000305481 NFU1Q9UMS0 254 aa7□□□□□ -1.29
USP47-201ENST00000305481 DOCK3Q8IZD9 2030 aa7□□□□□ -1.29
USP47-201ENST00000305481 ZSWIM8A7E2V4 1837 aa7□□□□□ -1.29
USP47-201ENST00000305481 COL1A2P08123 1366 aa7□□□□□ -1.29
USP47-201ENST00000305481 MROH7Q68CQ1 1323 aa7□□□□□ -1.29
USP47-201ENST00000305481 AGPSO00116 658 aa7□□□□□ -1.29
USP47-201ENST00000305481 MAGEB2O15479 319 aa7□□□□□ -1.29
USP47-201ENST00000305481 ECHS1P30084 290 aa7□□□□□ -1.29
USP47-201ENST00000305481 GNA15P30679 374 aa7□□□□□ -1.29
USP47-201ENST00000305481 ASPAP45381 313 aa7□□□□□ -1.29
USP47-201ENST00000305481 PHKA2P46019 1235 aa7□□□□□ -1.29
USP47-201ENST00000305481 NOMO3P69849 1222 aa7□□□□□ -1.29
USP47-201ENST00000305481 IRX5P78411 483 aaPredicted RBP7□□□□□ -1.29
USP47-201ENST00000305481 PTP4A2Q12974 167 aa7□□□□□ -1.29
USP47-201ENST00000305481 TERF2Q15554 542 aa7□□□□□ -1.29
USP47-201ENST00000305481 MORN1Q5T089 497 aa7□□□□□ -1.29
USP47-201ENST00000305481 ILDR2Q71H61 639 aa7□□□□□ -1.29
USP47-201ENST00000305481 ADAT2Q7Z6V5 191 aaKnown RBP7□□□□□ -1.29
USP47-201ENST00000305481 PASD1Q8IV76 773 aa7□□□□□ -1.29
USP47-201ENST00000305481 IFT20Q8IY31 132 aa7□□□□□ -1.29
USP47-201ENST00000305481 KIAA0319LQ8IZA0 1049 aa7□□□□□ -1.29
USP47-201ENST00000305481 CXorf38Q8TB03 319 aa7□□□□□ -1.29
USP47-201ENST00000305481 CPB2Q96IY4 423 aa7□□□□□ -1.29
USP47-201ENST00000305481 PDZD7Q9H5P4 517 aa7□□□□□ -1.29
USP47-201ENST00000305481 AMACRQ9UHK6 382 aa7□□□□□ -1.29
USP47-201ENST00000305481 SIX4Q9UIU6 781 aa7□□□□□ -1.29
USP47-201ENST00000305481 SLC15A5A6NIM6 579 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 MIF4GDA9UHW6 222 aaKnown RBP6.99□□□□□ -1.29
USP47-201ENST00000305481 SYF2O95926 243 aaKnown RBP6.99□□□□□ -1.29
USP47-201ENST00000305481 WEE2P0C1S8 567 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 STAG3L1P0CL83 205 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 ARF4P18085 180 aaPredicted RBP6.99□□□□□ -1.29
USP47-201ENST00000305481 AARSP49588 968 aaKnown RBP eCLIP6.99□□□□□ -1.29
USP47-201ENST00000305481 GYS2P54840 703 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 HUNKP57058 714 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 GABPB1Q06547 395 aaPredicted RBP6.99□□□□□ -1.29
USP47-201ENST00000305481 GRIK4Q16099 956 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 SGSM1Q2NKQ1 1148 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 IQSEC1Q6DN90 963 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 SND1Q7KZF4 910 aaKnown RBP eCLIP6.99□□□□□ -1.29
USP47-201ENST00000305481 TSEN2Q8NCE0 465 aaKnown RBP6.99□□□□□ -1.29
USP47-201ENST00000305481 OR6J1Q8NGC5 347 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 IFT81Q8WYA0 676 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 NMRK2Q9NPI5 230 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 AVENQ9NQS1 362 aaPredicted RBP6.99□□□□□ -1.29
USP47-201ENST00000305481 CISHQ9NSE2 258 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 PRMT7Q9NVM4 692 aaPredicted RBP6.99□□□□□ -1.29
USP47-201ENST00000305481 AKT3Q9Y243 479 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 PCDHA3Q9Y5H8 950 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 LACTBL1A8MY62 500 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 CCDC188H7C350 402 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 NFICP08651 508 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 PYGMP11217 842 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 CTNNA1P35221 906 aaKnown RBP6.99□□□□□ -1.29
USP47-201ENST00000305481 EPHB4P54760 987 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 PPFIA1Q13136 1202 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 TMEM132AQ24JP5 1023 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 ZNF606Q8WXB4 792 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 CAVIN3Q969G5 261 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 LENG1Q96BZ8 264 aaPredicted RBP6.99□□□□□ -1.29
USP47-201ENST00000305481 CELF4Q9BZC1 486 aaKnown RBP6.99□□□□□ -1.29
USP47-201ENST00000305481 NIF3L1Q9GZT8 377 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 GNEQ9Y223 722 aaKnown RBP6.99□□□□□ -1.29
USP47-201ENST00000305481 TCRBV7S2A1N4TA0A589 114 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 THAP12O43422 761 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 TSPAN1O60635 241 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 CD58P19256 250 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 CTNNA2P26232 953 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 TNFAIP2Q03169 654 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 HIC1Q14526 733 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 SURF1Q15526 300 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 DGKDQ16760 1214 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 SLC10A6Q3KNW5 377 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 EMBQ6PCB8 327 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 DDX42Q86XP3 938 aaKnown RBP eCLIP6.99□□□□□ -1.29
USP47-201ENST00000305481 PHF13Q86YI8 300 aaPredicted RBP6.99□□□□□ -1.29
USP47-201ENST00000305481 RASAL3Q86YV0 1011 aa6.99□□□□□ -1.29
USP47-201ENST00000305481 C1orf127Q8N9H9 656 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms