RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 ASB7Q9H672 318 aa28.72■■■□□ 2.19
CDKN2A-201ENST00000304494 SORCS3Q9UPU3 1222 aa28.72■■■□□ 2.19
CDKN2A-201ENST00000304494 HCN4Q9Y3Q4 1203 aa28.72■■■□□ 2.19
CDKN2A-201ENST00000304494 C2orf16Q68DN1 1984 aa28.71■■■□□ 2.19
CDKN2A-201ENST00000304494 MTMR3Q13615 1198 aa28.71■■■□□ 2.19
CDKN2A-201ENST00000304494 UVSSAQ2YD98 709 aa28.71■■■□□ 2.19
CDKN2A-201ENST00000304494 SPATA1Q5VX52 437 aa28.71■■■□□ 2.19
CDKN2A-201ENST00000304494 JADE1Q6IE81 842 aa28.71■■■□□ 2.19
CDKN2A-201ENST00000304494 RSPO2Q6UXX9 243 aaPredicted RBP28.71■■■□□ 2.19
CDKN2A-201ENST00000304494 SYCP3Q8IZU3 236 aa28.71■■■□□ 2.19
CDKN2A-201ENST00000304494 PYM1Q9BRP8 204 aaKnown RBP28.71■■■□□ 2.19
CDKN2A-201ENST00000304494 TRIM9Q9C026 710 aa28.71■■■□□ 2.19
CDKN2A-201ENST00000304494 TMEM206Q9H813 350 aa28.71■■■□□ 2.19
CDKN2A-201ENST00000304494 LIMD1Q9UGP4 676 aa28.71■■■□□ 2.19
CDKN2A-201ENST00000304494 RCOR1Q9UKL0 485 aa28.71■■■□□ 2.19
CDKN2A-201ENST00000304494 PCDHB8Q9UN66 801 aa28.71■■■□□ 2.19
CDKN2A-201ENST00000304494 POLR2DO15514 142 aaKnown RBP28.7■■■□□ 2.18
CDKN2A-201ENST00000304494 CASP5P51878 434 aa28.7■■■□□ 2.18
CDKN2A-201ENST00000304494 SIGLEC14Q08ET2 396 aa28.7■■■□□ 2.18
CDKN2A-201ENST00000304494 KCNA1Q09470 495 aa28.7■■■□□ 2.18
CDKN2A-201ENST00000304494 MRPL58Q14197 206 aaKnown RBP28.7■■■□□ 2.18
CDKN2A-201ENST00000304494 TMEM132DQ14C87 1099 aa28.7■■■□□ 2.18
CDKN2A-201ENST00000304494 CNNM4Q6P4Q7 775 aa28.7■■■□□ 2.18
CDKN2A-201ENST00000304494 TMEM221A6NGB7 291 aa28.69■■■□□ 2.18
CDKN2A-201ENST00000304494 M0R296 226 aa28.69■■■□□ 2.18
CDKN2A-201ENST00000304494 XYLBO75191 536 aa28.69■■■□□ 2.18
CDKN2A-201ENST00000304494 PAX3P23760 479 aa28.69■■■□□ 2.18
CDKN2A-201ENST00000304494 ADSSP30520 456 aa28.69■■■□□ 2.18
CDKN2A-201ENST00000304494 RESP18Q5W5W9 173 aa28.69■■■□□ 2.18
CDKN2A-201ENST00000304494 UBALD2Q8IYN6 164 aa28.69■■■□□ 2.18
CDKN2A-201ENST00000304494 SLC7A14Q8TBB6 771 aa28.69■■■□□ 2.18
CDKN2A-201ENST00000304494 IKZF4Q9H2S9 585 aa28.69■■■□□ 2.18
CDKN2A-201ENST00000304494 C2CD2Q9Y426 696 aa28.69■■■□□ 2.18
CDKN2A-201ENST00000304494 TRIOO75962 3097 aa28.69■■■□□ 2.18
CDKN2A-201ENST00000304494 M0QZQ0 153 aa28.68■■■□□ 2.18
CDKN2A-201ENST00000304494 LDHAP00338 332 aaKnown RBP28.68■■■□□ 2.18
CDKN2A-201ENST00000304494 NFICP08651 508 aa28.68■■■□□ 2.18
CDKN2A-201ENST00000304494 GARTP22102 1010 aa28.68■■■□□ 2.18
CDKN2A-201ENST00000304494 ASIC1P78348 528 aa28.68■■■□□ 2.18
CDKN2A-201ENST00000304494 ROR1Q01973 937 aa28.68■■■□□ 2.18
CDKN2A-201ENST00000304494 CTXN3Q4LDR2 81 aa28.68■■■□□ 2.18
CDKN2A-201ENST00000304494 ZNF280DQ6N043 979 aa28.68■■■□□ 2.18
CDKN2A-201ENST00000304494 HFE2Q6ZVN8 426 aa28.68■■■□□ 2.18
CDKN2A-201ENST00000304494 BMP8AQ7Z5Y6 402 aa28.68■■■□□ 2.18
CDKN2A-201ENST00000304494 ZNF461Q8TAF7 563 aa28.68■■■□□ 2.18
CDKN2A-201ENST00000304494 MFSD14AQ96MC6 490 aa28.68■■■□□ 2.18
CDKN2A-201ENST00000304494 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.68■■■□□ 2.18
CDKN2A-201ENST00000304494 TBC1D4O60343 1298 aa28.67■■■□□ 2.18
CDKN2A-201ENST00000304494 IL18RAPO95256 599 aa28.67■■■□□ 2.18
CDKN2A-201ENST00000304494 POU2F2P09086 479 aa28.67■■■□□ 2.18
CDKN2A-201ENST00000304494 GBP2P32456 591 aaPredicted RBP28.67■■■□□ 2.18
CDKN2A-201ENST00000304494 AARSP49588 968 aaKnown RBP eCLIP28.67■■■□□ 2.18
CDKN2A-201ENST00000304494 CRELD2Q6UXH1 353 aaPredicted RBP28.67■■■□□ 2.18
CDKN2A-201ENST00000304494 C7orf25Q9BPX7 421 aa28.67■■■□□ 2.18
CDKN2A-201ENST00000304494 OXCT2Q9BYC2 517 aaPredicted RBP28.67■■■□□ 2.18
CDKN2A-201ENST00000304494 FGFBP2Q9BYJ0 223 aa28.67■■■□□ 2.18
CDKN2A-201ENST00000304494 FBXL5Q9UKA1 691 aa28.67■■■□□ 2.18
CDKN2A-201ENST00000304494 ASGR2P07307 311 aa28.66■■■□□ 2.18
CDKN2A-201ENST00000304494 ELF1P32519 619 aa28.66■■■□□ 2.18
CDKN2A-201ENST00000304494 GUCY2FP51841 1108 aa28.66■■■□□ 2.18
CDKN2A-201ENST00000304494 YWHAHQ04917 246 aaPredicted RBP28.66■■■□□ 2.18
CDKN2A-201ENST00000304494 DSTYKQ6XUX3 929 aa28.66■■■□□ 2.18
CDKN2A-201ENST00000304494 FAM213AQ9BRX8 229 aa28.66■■■□□ 2.18
CDKN2A-201ENST00000304494 ATP6V1DQ9Y5K8 247 aa28.66■■■□□ 2.18
CDKN2A-201ENST00000304494 CCL16O15467 120 aa28.65■■■□□ 2.18
CDKN2A-201ENST00000304494 PRPF6O94906 941 aaKnown RBP28.65■■■□□ 2.18
CDKN2A-201ENST00000304494 ABLIM3O94929 683 aa28.65■■■□□ 2.18
CDKN2A-201ENST00000304494 ARPP19P56211 112 aa28.65■■■□□ 2.18
CDKN2A-201ENST00000304494 KRT85P78386 507 aa28.65■■■□□ 2.18
CDKN2A-201ENST00000304494 C9orf57Q5W0N0 161 aa28.65■■■□□ 2.18
CDKN2A-201ENST00000304494 TPGS2Q68CL5 300 aa28.65■■■□□ 2.18
CDKN2A-201ENST00000304494 NT5DC4Q86YG4 428 aa28.65■■■□□ 2.18
CDKN2A-201ENST00000304494 TMEM130Q8N3G9 435 aa28.65■■■□□ 2.18
CDKN2A-201ENST00000304494 EPS15L1Q9UBC2 864 aa28.65■■■□□ 2.18
CDKN2A-201ENST00000304494 RAPGEFL1Q9UHV5 662 aa28.65■■■□□ 2.18
CDKN2A-201ENST00000304494 KCNH3Q9ULD8 1083 aa28.65■■■□□ 2.18
CDKN2A-201ENST00000304494 ARHGEF37A1IGU5 675 aa28.64■■■□□ 2.18
CDKN2A-201ENST00000304494 WDR27A2RRH5 827 aa28.64■■■□□ 2.18
CDKN2A-201ENST00000304494 N4BP1O75113 896 aaKnown RBP28.64■■■□□ 2.18
CDKN2A-201ENST00000304494 ATF2P15336 505 aa28.64■■■□□ 2.18
CDKN2A-201ENST00000304494 LILRA4P59901 499 aa28.64■■■□□ 2.18
CDKN2A-201ENST00000304494 GET4Q7L5D6 327 aaPredicted RBP28.64■■■□□ 2.18
CDKN2A-201ENST00000304494 GRASPQ7Z6J2 395 aaPredicted RBP28.64■■■□□ 2.18
CDKN2A-201ENST00000304494 USP37Q86T82 979 aa28.64■■■□□ 2.18
CDKN2A-201ENST00000304494 CEP57L1Q8IYX8 460 aa28.64■■■□□ 2.18
CDKN2A-201ENST00000304494 PBXIP1Q96AQ6 731 aa28.64■■■□□ 2.18
CDKN2A-201ENST00000304494 SPATA32Q96LK8 384 aa28.64■■■□□ 2.18
CDKN2A-201ENST00000304494 IGSF9Q9P2J2 1179 aa28.64■■■□□ 2.18
CDKN2A-201ENST00000304494 POLIQ9UNA4 740 aa28.64■■■□□ 2.18
CDKN2A-201ENST00000304494 ZDHHC9Q9Y397 364 aa28.64■■■□□ 2.18
CDKN2A-201ENST00000304494 ARIH1Q9Y4X5 557 aaPredicted RBP28.64■■■□□ 2.18
CDKN2A-201ENST00000304494 ANO9A1A5B4 782 aa28.63■■■□□ 2.17
CDKN2A-201ENST00000304494 PIRO00625 290 aa28.63■■■□□ 2.17
CDKN2A-201ENST00000304494 PRRG1O14668 218 aa28.63■■■□□ 2.17
CDKN2A-201ENST00000304494 KIAA0391O15091 583 aaKnown RBP28.63■■■□□ 2.17
CDKN2A-201ENST00000304494 EIF3DO15371 548 aaKnown RBP eCLIP28.63■■■□□ 2.17
CDKN2A-201ENST00000304494 OAZ2O95190 189 aa28.63■■■□□ 2.17
CDKN2A-201ENST00000304494 FSHRP23945 695 aa28.63■■■□□ 2.17
CDKN2A-201ENST00000304494 BECN1Q14457 450 aa28.63■■■□□ 2.17
CDKN2A-201ENST00000304494 ARMCX5Q6P1M9 558 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms