RNA–Protein interactions for RNA: ENST00000303553.5

NDUFA3-201, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 2 BASIC

Gene NDUFA3, Length 379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-201ENST00000303553 CES5AQ6NT32 575 aa18.32■□□□□ 0.52
NDUFA3-201ENST00000303553 C12orf56Q8IXR9 622 aa18.32■□□□□ 0.52
NDUFA3-201ENST00000303553 XXYLT1Q8NBI6 393 aa18.32■□□□□ 0.52
NDUFA3-201ENST00000303553 APPL2Q8NEU8 664 aa18.32■□□□□ 0.52
NDUFA3-201ENST00000303553 SUSD3Q96L08 255 aa18.32■□□□□ 0.52
NDUFA3-201ENST00000303553 FBXL18Q96ME1 805 aa18.32■□□□□ 0.52
NDUFA3-201ENST00000303553 SFXN1Q9H9B4 322 aa18.32■□□□□ 0.52
NDUFA3-201ENST00000303553 PRKAG3Q9UGI9 489 aa18.32■□□□□ 0.52
NDUFA3-201ENST00000303553 PLXNA3P51805 1871 aa18.32■□□□□ 0.52
NDUFA3-201ENST00000303553 TCF20Q9UGU0 1960 aaKnown RBP18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 GOLGA8IPA6NC78 632 aa18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 GOLGA8JA6NMD2 632 aa18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 H7C4K7 107 aa18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 EPCAMP16422 314 aa18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 SMAD2Q15796 467 aaKnown RBP18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 PRSS55Q6UWB4 352 aaPredicted RBP18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 CD300LGQ6UXG3 332 aa18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 ELOA2Q8IYF1 753 aaPredicted RBP18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 LNX1Q8TBB1 728 aaPredicted RBP18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 HDAC7Q8WUI4 952 aa18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 GSDMAQ96QA5 445 aa18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 UHRF1Q96T88 793 aaPredicted RBP18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 POP1Q99575 1024 aaKnown RBP18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 DPP3Q9NY33 737 aa18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 MTRRQ9UBK8 725 aa18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 BACE2Q9Y5Z0 518 aa18.31■□□□□ 0.52
NDUFA3-201ENST00000303553 MTCL1Q9Y4B5 1905 aaKnown RBP18.3■□□□□ 0.52
NDUFA3-201ENST00000303553 TULP1O00294 542 aaPredicted RBP18.3■□□□□ 0.52
NDUFA3-201ENST00000303553 PDXKO00764 312 aa18.3■□□□□ 0.52
NDUFA3-201ENST00000303553 IL9P15248 144 aa18.3■□□□□ 0.52
NDUFA3-201ENST00000303553 TKTP29401 623 aaKnown RBP18.3■□□□□ 0.52
NDUFA3-201ENST00000303553 TFAMQ00059 246 aaKnown RBP18.3■□□□□ 0.52
NDUFA3-201ENST00000303553 SNRNP35Q16560 246 aaKnown RBP18.3■□□□□ 0.52
NDUFA3-201ENST00000303553 C9orf57Q5W0N0 161 aa18.3■□□□□ 0.52
NDUFA3-201ENST00000303553 ZNF560Q96MR9 790 aa18.3■□□□□ 0.52
NDUFA3-201ENST00000303553 NECTIN4Q96NY8 510 aa18.3■□□□□ 0.52
NDUFA3-201ENST00000303553 OXCT2Q9BYC2 517 aaPredicted RBP18.3■□□□□ 0.52
NDUFA3-201ENST00000303553 PLEKHA4Q9H4M7 779 aa18.3■□□□□ 0.52
NDUFA3-201ENST00000303553 PCDHB8Q9UN66 801 aa18.3■□□□□ 0.52
NDUFA3-201ENST00000303553 R3HCC1Q9Y3T6 440 aaKnown RBP18.3■□□□□ 0.52
NDUFA3-201ENST00000303553 I3L4J1 428 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 M0QZQ0 153 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 CLIC2O15247 247 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 CALUO43852 315 aaPredicted RBP18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 EXOC3O60645 756 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 PRPF40AO75400 957 aaKnown RBP18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 TMEM191BP0C7N4 346 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 PNPLA4P41247 253 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 AARSP49588 968 aaKnown RBP eCLIP18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 CYP2J2P51589 502 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 UBE2HP62256 183 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 PNOCQ13519 176 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 VARS2Q5ST30 1063 aaKnown RBP18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 ZNF280DQ6N043 979 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 SYCE2Q6PIF2 218 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 DSTYKQ6XUX3 929 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 CBWD2Q8IUF1 395 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 EFCAB13Q8IY85 973 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 GUF1Q8N442 669 aaKnown RBP18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 TMEM174Q8WUU8 243 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 SMARCE1Q969G3 411 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 ANKRD36BP1Q96IX9 119 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 RIPOR3Q96MK2 946 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 COL25A1Q9BXS0 654 aaPredicted RBP18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 ADAM7Q9H2U9 754 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 MAN1C1Q9NR34 630 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 ITGA11Q9UKX5 1188 aa18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 USP15Q9Y4E8 981 aaPredicted RBP18.29■□□□□ 0.52
NDUFA3-201ENST00000303553 ANO9A1A5B4 782 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 PIRO00625 290 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 TNNC2P02585 160 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 ODC1P11926 461 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 RPL17P18621 184 aaKnown RBP18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 MTHFRP42898 656 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 TAF6P49848 677 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 GUCY2FP51841 1108 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 LILRA4P59901 499 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 MYBPC2Q14324 1141 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 SV2CQ496J9 727 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 LIN9Q5TKA1 542 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 CYP26C1Q6V0L0 522 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 USP37Q86T82 979 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 PALB2Q86YC2 1186 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 WDR49Q8IV35 697 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 SLC9A9Q8IVB4 645 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 GLYCTKQ8IVS8 523 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 ZSWIM2Q8NEG5 633 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 IPO9Q96P70 1041 aaKnown RBP18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 FNBP1Q96RU3 617 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 CLSTN3Q9BQT9 956 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 S1PR5Q9H228 398 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 PDE11AQ9HCR9 933 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 CDY1Q9Y6F8 540 aa18.28■□□□□ 0.52
NDUFA3-201ENST00000303553 A0A0C4DFX4 3053 aa18.27■□□□□ 0.52
NDUFA3-201ENST00000303553 TGM5O43548 720 aa18.27■□□□□ 0.52
NDUFA3-201ENST00000303553 IGFBP6P24592 240 aaPredicted RBP18.27■□□□□ 0.52
NDUFA3-201ENST00000303553 YWHAHQ04917 246 aaPredicted RBP18.27■□□□□ 0.52
NDUFA3-201ENST00000303553 RAB33AQ14088 237 aa18.27■□□□□ 0.52
NDUFA3-201ENST00000303553 CBX2Q14781 532 aaPredicted RBP18.27■□□□□ 0.52
NDUFA3-201ENST00000303553 RARS2Q5T160 578 aaKnown RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms