RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 TTC30BQ8N4P2 665 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 MTBPQ96DY7 904 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 HLA-DRAP01903 254 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 RALAP11233 206 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 RPA1P27694 616 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 NNMTP40261 264 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 SERPINB4P48594 390 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 NYAP1Q6ZVC0 841 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 ASAP3Q8TDY4 903 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 CYFIP2Q96F07 1278 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 TMEM8AQ9HCN3 771 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 PCDHB2Q9Y5E7 798 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 CCDC78A2IDD5 438 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 GRIK1P39086 918 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 PTK7Q13308 1070 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 KYNUQ16719 465 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 GJB7Q6PEY0 223 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 MMGT1Q8N4V1 131 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 NAF1Q96HR8 494 aaKnown RBP14.64□□□□□ -0.07
PRKCB-201ENST00000303531 LBHD1Q9BQE6 289 aaPredicted RBP14.64□□□□□ -0.07
PRKCB-201ENST00000303531 ZNF212Q9UDV6 495 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 TEKT2Q9UIF3 430 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 TMEM120BA0PK00 339 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 DNAJC6O75061 913 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 GRAP2O75791 330 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 NR3C2P08235 984 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 ITGA8P53708 1063 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 ERP44Q9BS26 406 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 TJP2Q9UDY2 1190 aa14.64□□□□□ -0.07
PRKCB-201ENST00000303531 KDM6AO15550 1401 aaPredicted RBP14.64□□□□□ -0.07
PRKCB-201ENST00000303531 KRT4P19013 534 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 KCNJ1P48048 391 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 PRR5LQ6MZQ0 368 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 ELOA2Q8IYF1 753 aaPredicted RBP14.63□□□□□ -0.07
PRKCB-201ENST00000303531 OR6J1Q8NGC5 347 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 ERP27Q96DN0 273 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 TRIM54Q9BYV2 358 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 PRKCEQ02156 737 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 ERGIC2Q96RQ1 377 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 COG4Q9H9E3 785 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 MAGEA4P43358 317 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 DACH2Q96NX9 599 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 MAP3K14Q99558 947 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 COBLL1Q53SF7 1204 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 ZNF507Q8TCN5 953 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 USP33Q8TEY7 942 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 ANGPT2O15123 496 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 MYO1DO94832 1006 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 TRAPPC11Q7Z392 1133 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 SYN2Q92777 582 aaPredicted RBP14.63□□□□□ -0.07
PRKCB-201ENST00000303531 RASSF10A6NK89 507 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 AGGF1Q8N302 714 aaeCLIP14.63□□□□□ -0.079e-8■■■■■ 28.5
PRKCB-201ENST00000303531 MKNK1Q9BUB5 465 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 CHORDC1Q9UHD1 332 aaPredicted RBP14.63□□□□□ -0.07
PRKCB-201ENST00000303531 PDGFRBP09619 1106 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 HHIPL2Q6UWX4 724 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 C3orf62Q6ZUJ4 267 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 TRPM8Q7Z2W7 1104 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 CATSPER3Q86XQ3 398 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 MXRA8Q9BRK3 442 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 PI4K2AQ9BTU6 479 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 MAD2L2Q9UI95 211 aa14.63□□□□□ -0.07
PRKCB-201ENST00000303531 TRIM66O15016 1216 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 DYNC1I2Q13409 638 aaKnown RBP14.62□□□□□ -0.07
PRKCB-201ENST00000303531 FLOT2Q14254 428 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 FASTKD5Q7L8L6 764 aaKnown RBP14.62□□□□□ -0.07
PRKCB-201ENST00000303531 SPATA2LQ8IUW3 424 aaPredicted RBP14.62□□□□□ -0.07
PRKCB-201ENST00000303531 ARHGAP18Q8N392 663 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 CEP152O94986 1710 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 ENTPD3O75355 529 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 PLEKP08567 350 aaPredicted RBP14.62□□□□□ -0.07
PRKCB-201ENST00000303531 SERPINB9P50453 376 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 MTM1Q13496 603 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 EPC2Q52LR7 807 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 SEPT1Q8WYJ6 367 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 CYTH1Q15438 398 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 SMTNL2Q2TAL5 461 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 TTC23LQ6PF05 361 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 CATSPER1Q8NEC5 780 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 SPATA18Q8TC71 538 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 MED15Q96RN5 788 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 KLF6Q99612 283 aaPredicted RBP14.62□□□□□ -0.07
PRKCB-201ENST00000303531 ROPN1BQ9BZX4 212 aaPredicted RBP14.62□□□□□ -0.07
PRKCB-201ENST00000303531 VCPKMTQ9H867 229 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 ROPN1Q9HAT0 212 aaPredicted RBP14.62□□□□□ -0.07
PRKCB-201ENST00000303531 RNF181Q9P0P0 153 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 E9PCH4 1651 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 AP3B1O00203 1094 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 NTSR2O95665 410 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 SEC24CP53992 1094 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 CNGA3Q16281 694 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 DNAL1Q4LDG9 190 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 FBXO33Q7Z6M2 555 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 TMA16Q96EY4 203 aaKnown RBP14.62□□□□□ -0.07
PRKCB-201ENST00000303531 TEX12Q9BXU0 123 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 ELP3Q9H9T3 547 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 SEC24DO94855 1032 aaPredicted RBP14.62□□□□□ -0.07
PRKCB-201ENST00000303531 LRRC36Q1X8D7 754 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 SMARCAD1Q9H4L7 1026 aa14.62□□□□□ -0.07
PRKCB-201ENST00000303531 PPCSQ9HAB8 311 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms