RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 AGAP1Q9UPQ3 857 aa26.42■■□□□ 1.82
HOXC9-201ENST00000303450 CHD7Q9P2D1 2997 aa26.42■■□□□ 1.82
HOXC9-201ENST00000303450 PIRO00625 290 aa26.41■■□□□ 1.82
HOXC9-201ENST00000303450 GCLMP48507 274 aa26.41■■□□□ 1.82
HOXC9-201ENST00000303450 RBP5P82980 135 aa26.41■■□□□ 1.82
HOXC9-201ENST00000303450 IRF2BP1Q8IU81 584 aa26.41■■□□□ 1.82
HOXC9-201ENST00000303450 AOPEPQ8N6M6 819 aa26.41■■□□□ 1.82
HOXC9-201ENST00000303450 GDPD5Q8WTR4 605 aa26.41■■□□□ 1.82
HOXC9-201ENST00000303450 FAM161BQ96MY7 647 aa26.41■■□□□ 1.82
HOXC9-201ENST00000303450 SAMSN1Q9NSI8 373 aaKnown RBP26.41■■□□□ 1.82
HOXC9-201ENST00000303450 SF3B1O75533 1304 aaKnown RBP eCLIP26.4■■□□□ 1.82
HOXC9-201ENST00000303450 PPEF2O14830 753 aa26.4■■□□□ 1.82
HOXC9-201ENST00000303450 CAVIN2O95810 425 aa26.4■■□□□ 1.82
HOXC9-201ENST00000303450 IGFBP6P24592 240 aaPredicted RBP26.4■■□□□ 1.82
HOXC9-201ENST00000303450 GTF2H1P32780 548 aa26.4■■□□□ 1.82
HOXC9-201ENST00000303450 FXR1P51114 621 aaKnown RBP eCLIP26.4■■□□□ 1.82
HOXC9-201ENST00000303450 UBE3AQ05086 875 aa26.4■■□□□ 1.82
HOXC9-201ENST00000303450 PPP3CAQ08209 521 aa26.4■■□□□ 1.82
HOXC9-201ENST00000303450 HSP90AA4PQ58FG1 418 aa26.4■■□□□ 1.82
HOXC9-201ENST00000303450 FUT10Q6P4F1 479 aa26.4■■□□□ 1.82
HOXC9-201ENST00000303450 DDX53Q86TM3 631 aaKnown RBP26.4■■□□□ 1.82
HOXC9-201ENST00000303450 SPPL3Q8TCT6 385 aa26.4■■□□□ 1.82
HOXC9-201ENST00000303450 STK39Q9UEW8 545 aa26.4■■□□□ 1.82
HOXC9-201ENST00000303450 SIX4Q9UIU6 781 aa26.4■■□□□ 1.82
HOXC9-201ENST00000303450 LZTS1Q9Y250 596 aa26.4■■□□□ 1.82
HOXC9-201ENST00000303450 PLXNA4Q9HCM2 1894 aa26.4■■□□□ 1.82
HOXC9-201ENST00000303450 SMTNL1A8MU46 457 aa26.39■■□□□ 1.82
HOXC9-201ENST00000303450 RFXAPO00287 272 aa26.39■■□□□ 1.82
HOXC9-201ENST00000303450 GRM6O15303 877 aa26.39■■□□□ 1.82
HOXC9-201ENST00000303450 TRAPPC3O43617 180 aa26.39■■□□□ 1.82
HOXC9-201ENST00000303450 C4BPAP04003 597 aaKnown RBP26.39■■□□□ 1.82
HOXC9-201ENST00000303450 TRPC3Q13507 836 aa26.39■■□□□ 1.82
HOXC9-201ENST00000303450 GRIN2CQ14957 1233 aa26.39■■□□□ 1.82
HOXC9-201ENST00000303450 TDRD10Q5VZ19 366 aaKnown RBP26.39■■□□□ 1.82
HOXC9-201ENST00000303450 LRSAM1Q6UWE0 723 aa26.39■■□□□ 1.82
HOXC9-201ENST00000303450 SV2AQ7L0J3 742 aa26.39■■□□□ 1.82
HOXC9-201ENST00000303450 TRIM59Q8IWR1 403 aa26.39■■□□□ 1.82
HOXC9-201ENST00000303450 POF1BQ8WVV4 589 aa26.39■■□□□ 1.82
HOXC9-201ENST00000303450 SLC35C1Q96A29 364 aa26.39■■□□□ 1.82
HOXC9-201ENST00000303450 ZNF560Q96MR9 790 aa26.39■■□□□ 1.82
HOXC9-201ENST00000303450 PRDM12Q9H4Q4 367 aa26.39■■□□□ 1.82
HOXC9-201ENST00000303450 FANCLQ9NW38 375 aa26.39■■□□□ 1.82
HOXC9-201ENST00000303450 PNPLA4P41247 253 aa26.39■■□□□ 1.81
HOXC9-201ENST00000303450 MTIF2P46199 727 aaKnown RBP26.39■■□□□ 1.81
HOXC9-201ENST00000303450 LILRA4P59901 499 aa26.39■■□□□ 1.81
HOXC9-201ENST00000303450 ELAVL2Q12926 359 aaKnown RBP26.39■■□□□ 1.81
HOXC9-201ENST00000303450 ZACNQ401N2 412 aa26.39■■□□□ 1.81
HOXC9-201ENST00000303450 CD300LGQ6UXG3 332 aa26.39■■□□□ 1.81
HOXC9-201ENST00000303450 CXorf38Q8TB03 319 aa26.39■■□□□ 1.81
HOXC9-201ENST00000303450 TMEM8AQ9HCN3 771 aa26.39■■□□□ 1.81
HOXC9-201ENST00000303450 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.39■■□□□ 1.81
HOXC9-201ENST00000303450 SCN1AP35498 2009 aa26.38■■□□□ 1.81
HOXC9-201ENST00000303450 BECN2A8MW95 431 aa26.38■■□□□ 1.81
HOXC9-201ENST00000303450 BRCC3P46736 316 aa26.38■■□□□ 1.81
HOXC9-201ENST00000303450 TAF6P49848 677 aa26.38■■□□□ 1.81
HOXC9-201ENST00000303450 KRT39Q6A163 491 aa26.38■■□□□ 1.81
HOXC9-201ENST00000303450 LRRC52Q8N7C0 313 aa26.38■■□□□ 1.81
HOXC9-201ENST00000303450 GPR62Q9BZJ7 368 aa26.38■■□□□ 1.81
HOXC9-201ENST00000303450 TSPY26PQ9H489 355 aa26.38■■□□□ 1.81
HOXC9-201ENST00000303450 KCNJ18B7U540 433 aa26.37■■□□□ 1.81
HOXC9-201ENST00000303450 CST3P01034 146 aaPredicted RBP26.37■■□□□ 1.81
HOXC9-201ENST00000303450 PAX3P23760 479 aa26.37■■□□□ 1.81
HOXC9-201ENST00000303450 MXI1P50539 228 aa26.37■■□□□ 1.81
HOXC9-201ENST00000303450 MYO1EQ12965 1108 aa26.37■■□□□ 1.81
HOXC9-201ENST00000303450 KCNJ12Q14500 433 aa26.37■■□□□ 1.81
HOXC9-201ENST00000303450 NCAPHQ15003 741 aa26.37■■□□□ 1.81
HOXC9-201ENST00000303450 SCARA3Q6AZY7 606 aa26.37■■□□□ 1.81
HOXC9-201ENST00000303450 C15orf39Q6ZRI6 1047 aa26.37■■□□□ 1.81
HOXC9-201ENST00000303450 DHX40Q8IX18 779 aaKnown RBP26.37■■□□□ 1.81
HOXC9-201ENST00000303450 VPS52Q8N1B4 723 aa26.37■■□□□ 1.81
HOXC9-201ENST00000303450 VN1R3Q9BXE9 311 aa26.37■■□□□ 1.81
HOXC9-201ENST00000303450 I3L4J1 428 aa26.36■■□□□ 1.81
HOXC9-201ENST00000303450 CSPG5O95196 566 aa26.36■■□□□ 1.81
HOXC9-201ENST00000303450 SOD2P04179 222 aa26.36■■□□□ 1.81
HOXC9-201ENST00000303450 DNAJB1P25685 340 aa26.36■■□□□ 1.81
HOXC9-201ENST00000303450 EEF1GP26641 437 aaKnown RBP26.36■■□□□ 1.81
HOXC9-201ENST00000303450 NCOA4Q13772 614 aa26.36■■□□□ 1.81
HOXC9-201ENST00000303450 SV2CQ496J9 727 aa26.36■■□□□ 1.81
HOXC9-201ENST00000303450 TIGD5Q53EQ6 642 aa26.36■■□□□ 1.81
HOXC9-201ENST00000303450 FAM171A1Q5VUB5 890 aa26.36■■□□□ 1.81
HOXC9-201ENST00000303450 Q7L0L9 218 aa26.36■■□□□ 1.81
HOXC9-201ENST00000303450 HPDLQ96IR7 371 aa26.36■■□□□ 1.81
HOXC9-201ENST00000303450 LMAN2LQ9H0V9 348 aa26.36■■□□□ 1.81
HOXC9-201ENST00000303450 TLR9Q9NR96 1032 aa26.36■■□□□ 1.81
HOXC9-201ENST00000303450 CLSTN1O94985 981 aa26.35■■□□□ 1.81
HOXC9-201ENST00000303450 EFEMP2O95967 443 aa26.35■■□□□ 1.81
HOXC9-201ENST00000303450 ZNF445P59923 1031 aa26.35■■□□□ 1.81
HOXC9-201ENST00000303450 KCNH2Q12809 1159 aa26.35■■□□□ 1.81
HOXC9-201ENST00000303450 BMS1Q14692 1282 aaKnown RBP26.35■■□□□ 1.81
HOXC9-201ENST00000303450 PTPROQ16827 1216 aa26.35■■□□□ 1.81
HOXC9-201ENST00000303450 USP41Q3LFD5 358 aa26.35■■□□□ 1.81
HOXC9-201ENST00000303450 TCP11X2Q5H9J9 407 aa26.35■■□□□ 1.81
HOXC9-201ENST00000303450 CDKAL1Q5VV42 579 aa26.35■■□□□ 1.81
HOXC9-201ENST00000303450 DSTYKQ6XUX3 929 aa26.35■■□□□ 1.81
HOXC9-201ENST00000303450 DEFB123Q8N688 67 aa26.35■■□□□ 1.81
HOXC9-201ENST00000303450 SUSD3Q96L08 255 aa26.35■■□□□ 1.81
HOXC9-201ENST00000303450 CBX8Q9HC52 389 aa26.35■■□□□ 1.81
HOXC9-201ENST00000303450 CDH23Q9H251 3354 aa26.35■■□□□ 1.81
HOXC9-201ENST00000303450 COL4A4P53420 1690 aaPredicted RBP26.35■■□□□ 1.81
HOXC9-201ENST00000303450 KPNA7A9QM74 516 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms