RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 MANSC4A6NHS7 340 aaPredicted RBP20.74■□□□□ 0.91
HOXC4-201ENST00000303406 SART1O43290 800 aaKnown RBP20.74■□□□□ 0.91
HOXC4-201ENST00000303406 FGGP02679 453 aa20.74■□□□□ 0.91
HOXC4-201ENST00000303406 ZNF286BP0CG31 522 aa20.74■□□□□ 0.91
HOXC4-201ENST00000303406 MYL6P60660 151 aa20.74■□□□□ 0.91
HOXC4-201ENST00000303406 GUCY2DQ02846 1103 aa20.74■□□□□ 0.91
HOXC4-201ENST00000303406 C1QBPQ07021 282 aaKnown RBP20.74■□□□□ 0.91
HOXC4-201ENST00000303406 GRIK4Q16099 956 aa20.74■□□□□ 0.91
HOXC4-201ENST00000303406 PTPROQ16827 1216 aa20.74■□□□□ 0.91
HOXC4-201ENST00000303406 KLHL7Q8IXQ5 586 aa20.74■□□□□ 0.91
HOXC4-201ENST00000303406 EFCAB13Q8IY85 973 aa20.74■□□□□ 0.91
HOXC4-201ENST00000303406 THNSL1Q8IYQ7 743 aa20.74■□□□□ 0.91
HOXC4-201ENST00000303406 FAM71BQ8TC56 605 aa20.74■□□□□ 0.91
HOXC4-201ENST00000303406 WHAMMQ8TF30 809 aa20.74■□□□□ 0.91
HOXC4-201ENST00000303406 ALG3Q92685 438 aa20.74■□□□□ 0.91
HOXC4-201ENST00000303406 FDXACB1Q9BRP7 624 aaPredicted RBP20.74■□□□□ 0.91
HOXC4-201ENST00000303406 EPB41L5Q9HCM4 733 aa20.74■□□□□ 0.91
HOXC4-201ENST00000303406 AKT3Q9Y243 479 aa20.74■□□□□ 0.91
HOXC4-201ENST00000303406 UMODL1Q5DID0 1318 aa20.74■□□□□ 0.91
HOXC4-201ENST00000303406 ATMINO43313 823 aaPredicted RBP20.73■□□□□ 0.91
HOXC4-201ENST00000303406 LSM8O95777 96 aaKnown RBP20.73■□□□□ 0.91
HOXC4-201ENST00000303406 MAP2K5Q13163 448 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 SEL1L2Q5TEA6 688 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 NT5DC4Q86YG4 428 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 GSPT2Q8IYD1 628 aaKnown RBP20.73■□□□□ 0.91
HOXC4-201ENST00000303406 MREGQ8N565 214 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 XYLT2Q9H1B5 865 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 PDZD7Q9H5P4 517 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 FAM124BQ9H5Z6 455 aaPredicted RBP20.73■□□□□ 0.91
HOXC4-201ENST00000303406 LCMT1Q9UIC8 334 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 ZHX1Q9UKY1 873 aaPredicted RBP20.73■□□□□ 0.91
HOXC4-201ENST00000303406 H3BQF6 201 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 GPR25O00155 361 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 IQCF3P0C7M6 154 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 TFAMQ00059 246 aaKnown RBP20.73■□□□□ 0.91
HOXC4-201ENST00000303406 ZNF699Q32M78 642 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 HSP90B2PQ58FF3 399 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 NAA35Q5VZE5 725 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 SND1Q7KZF4 910 aaKnown RBP eCLIP20.73■□□□□ 0.91
HOXC4-201ENST00000303406 CASKIN2Q8WXE0 1202 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 SEC14L1Q92503 715 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 FAM212AQ96EL1 285 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 CYFIP2Q96F07 1278 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 AP1M1Q9BXS5 423 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 ZNF518BQ9C0D4 1074 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 VRTNQ9H8Y1 702 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 MRPL47Q9HD33 250 aaKnown RBP20.73■□□□□ 0.91
HOXC4-201ENST00000303406 SCINQ9Y6U3 715 aa20.73■□□□□ 0.91
HOXC4-201ENST00000303406 A6NJR5 290 aa20.72■□□□□ 0.91
HOXC4-201ENST00000303406 THAP12O43422 761 aa20.72■□□□□ 0.91
HOXC4-201ENST00000303406 SPOPO43791 374 aa20.72■□□□□ 0.91
HOXC4-201ENST00000303406 STAG3L1P0CL83 205 aa20.72■□□□□ 0.91
HOXC4-201ENST00000303406 ATICP31939 592 aa20.72■□□□□ 0.91
HOXC4-201ENST00000303406 PCBP1Q15365 356 aaKnown RBP eCLIP20.72■□□□□ 0.91
HOXC4-201ENST00000303406 MARCH8Q5T0T0 291 aa20.72■□□□□ 0.91
HOXC4-201ENST00000303406 CST9Q5W186 159 aa20.72■□□□□ 0.91
HOXC4-201ENST00000303406 RASAL3Q86YV0 1011 aa20.72■□□□□ 0.91
HOXC4-201ENST00000303406 KRT35Q92764 455 aa20.72■□□□□ 0.91
HOXC4-201ENST00000303406 ZBTB10Q96DT7 871 aa20.72■□□□□ 0.91
HOXC4-201ENST00000303406 RUNDC3BQ96NL0 473 aa20.72■□□□□ 0.91
HOXC4-201ENST00000303406 PLVAPQ9BX97 442 aa20.72■□□□□ 0.91
HOXC4-201ENST00000303406 PCDHGC3Q9UN70 934 aa20.72■□□□□ 0.91
HOXC4-201ENST00000303406 FAM187AA6NFU0 413 aa20.71■□□□□ 0.91
HOXC4-201ENST00000303406 TMEM110-MUSTN1A8MSY1 372 aa20.71■□□□□ 0.91
HOXC4-201ENST00000303406 ITGA4P13612 1032 aa20.71■□□□□ 0.91
HOXC4-201ENST00000303406 CDH5P33151 784 aaPredicted RBP20.71■□□□□ 0.91
HOXC4-201ENST00000303406 CARSP49589 748 aaKnown RBP20.71■□□□□ 0.91
HOXC4-201ENST00000303406 HUNKP57058 714 aa20.71■□□□□ 0.91
HOXC4-201ENST00000303406 RWDD2BP57060 319 aa20.71■□□□□ 0.91
HOXC4-201ENST00000303406 PTP4A2Q12974 167 aa20.71■□□□□ 0.91
HOXC4-201ENST00000303406 DHX34Q14147 1143 aaKnown RBP20.71■□□□□ 0.91
HOXC4-201ENST00000303406 TERF2Q15554 542 aa20.71■□□□□ 0.91
HOXC4-201ENST00000303406 ALS2CLQ60I27 953 aa20.71■□□□□ 0.91
HOXC4-201ENST00000303406 PLEKHA7Q6IQ23 1121 aa20.71■□□□□ 0.91
HOXC4-201ENST00000303406 APBB1IPQ7Z5R6 666 aaPredicted RBP20.71■□□□□ 0.91
HOXC4-201ENST00000303406 CD302Q8IX05 232 aa20.71■□□□□ 0.91
HOXC4-201ENST00000303406 CEP120Q8N960 986 aa20.71■□□□□ 0.91
HOXC4-201ENST00000303406 ZNF606Q8WXB4 792 aa20.71■□□□□ 0.91
HOXC4-201ENST00000303406 DDX47Q9H0S4 455 aaKnown RBP20.71■□□□□ 0.91
HOXC4-201ENST00000303406 ST7Q9NRC1 585 aa20.71■□□□□ 0.91
HOXC4-201ENST00000303406 CISHQ9NSE2 258 aa20.71■□□□□ 0.91
HOXC4-201ENST00000303406 ANAPC7Q9UJX3 599 aa20.71■□□□□ 0.91
HOXC4-201ENST00000303406 GNEQ9Y223 722 aaKnown RBP20.71■□□□□ 0.91
HOXC4-201ENST00000303406 MROH7Q68CQ1 1323 aa20.71■□□□□ 0.91
HOXC4-201ENST00000303406 UTRNP46939 3433 aa20.7■□□□□ 0.9
HOXC4-201ENST00000303406 STAU1O95793 577 aaKnown RBP20.7■□□□□ 0.9
HOXC4-201ENST00000303406 ITGBL1O95965 494 aaPredicted RBP20.7■□□□□ 0.9
HOXC4-201ENST00000303406 CXCL8P10145 99 aa20.7■□□□□ 0.9
HOXC4-201ENST00000303406 ARF4P18085 180 aaPredicted RBP20.7■□□□□ 0.9
HOXC4-201ENST00000303406 RRM1P23921 792 aa20.7■□□□□ 0.9
HOXC4-201ENST00000303406 ASPAP45381 313 aa20.7■□□□□ 0.9
HOXC4-201ENST00000303406 MRPS25P82663 173 aaKnown RBP20.7■□□□□ 0.9
HOXC4-201ENST00000303406 KIAA0319LQ8IZA0 1049 aa20.7■□□□□ 0.9
HOXC4-201ENST00000303406 CPA5Q8WXQ8 436 aa20.7■□□□□ 0.9
HOXC4-201ENST00000303406 USP6NLQ92738 828 aa20.7■□□□□ 0.9
HOXC4-201ENST00000303406 BCO2Q9BYV7 579 aa20.7■□□□□ 0.9
HOXC4-201ENST00000303406 ADAM22Q9P0K1 906 aa20.7■□□□□ 0.9
HOXC4-201ENST00000303406 A0A1B0GUA9 196 aa20.69■□□□□ 0.9
HOXC4-201ENST00000303406 TSPAN1O60635 241 aa20.69■□□□□ 0.9
HOXC4-201ENST00000303406 F2P00734 622 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms