RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 BUB1BO60566 1050 aaPredicted RBP15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 KPNA6O60684 536 aa15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 NFICP08651 508 aa15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 C2orf54Q08AI8 447 aa15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 DEFB115Q30KQ5 88 aa15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 ZNF394Q53GI3 561 aa15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 NOTUMQ6P988 496 aa15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 CREG2Q8IUH2 290 aa15.52■□□□□ 0.08
SHCBP1-201ENST00000303383 A0A1B0GUA9 196 aa15.52■□□□□ 0.07
SHCBP1-201ENST00000303383 AOC2O75106 756 aa15.52■□□□□ 0.07
SHCBP1-201ENST00000303383 CTGFP29279 349 aa15.52■□□□□ 0.07
SHCBP1-201ENST00000303383 ACAD10Q6JQN1 1059 aa15.52■□□□□ 0.07
SHCBP1-201ENST00000303383 RUFY4Q6ZNE9 571 aa15.52■□□□□ 0.07
SHCBP1-201ENST00000303383 CALR3Q96L12 384 aaKnown RBP15.52■□□□□ 0.07
SHCBP1-201ENST00000303383 CEP104O60308 925 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 ERLIN1O75477 346 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 ITGB3P05106 788 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 P4HA1P13674 534 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 PRKCZQ05513 592 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 WDR72Q3MJ13 1102 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 TRIB2Q92519 343 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 ATMINO43313 823 aaPredicted RBP15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 PGK1P00558 417 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 WEE2P0C1S8 567 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 EIF4BP23588 611 aaKnown RBP15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 ZNF200P98182 395 aaPredicted RBP15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 CLEC16AQ2KHT3 1053 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 NAA35Q5VZE5 725 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 PASD1Q8IV76 773 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 KIF12Q96FN5 646 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 CAPNS2Q96L46 248 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 MTG1Q9BT17 334 aaPredicted RBP15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 PIN4Q9Y237 131 aaKnown RBP15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 MROH7Q68CQ1 1323 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 MBLAC1A4D2B0 266 aaPredicted RBP15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 PDE2AO00408 941 aaPredicted RBP15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 TOMM70O94826 608 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 PURAQ00577 322 aaKnown RBP15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 SP3Q02447 781 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 MESDQ14696 234 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 SLC27A1Q6PCB7 646 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 TRIM72Q6ZMU5 477 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 LRRC57Q8N9N7 239 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 OLIG1Q8TAK6 271 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 TRIM11Q96F44 468 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 MS4A14Q96JA4 679 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 PBKQ96KB5 322 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 NUP85Q9BW27 656 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 APOL6Q9BWW8 343 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 CISHQ9NSE2 258 aa15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 CNOT8Q9UFF9 292 aaKnown RBP15.51■□□□□ 0.07
SHCBP1-201ENST00000303383 TUBBP07437 444 aa15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 DARSP14868 501 aaKnown RBP15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 CLCN6P51797 869 aa15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 LIN9Q5TKA1 542 aa15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 CPA5Q8WXQ8 436 aa15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 ADAMTS10Q9H324 1103 aa15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 SMARCAL1Q9NZC9 954 aa15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 EHD2Q9NZN4 543 aa15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 CHORDC1Q9UHD1 332 aaPredicted RBP15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 GTF3C4Q9UKN8 822 aa15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 CEP83Q9Y592 693 aa15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 CD19P15391 556 aa15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 ZSCAN20P17040 1043 aaPredicted RBP15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 ACO1P21399 889 aaKnown RBP15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 SSTR3P32745 418 aaPredicted RBP15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 PCBP1Q15365 356 aaKnown RBP eCLIP15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 CXCL17Q6UXB2 119 aa15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 SPATA4Q8NEY3 305 aa15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 ZNF564Q8TBZ8 553 aaPredicted RBP15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 DDX1Q92499 740 aaKnown RBP15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 ARFGAP3Q9NP61 516 aa15.5■□□□□ 0.07
SHCBP1-201ENST00000303383 HAS3O00219 553 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 MCM3P25205 808 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 POU5F1Q01860 360 aaKnown RBP15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 SLC10A6Q3KNW5 377 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 RSPH3Q86UC2 560 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 CDHR5Q9HBB8 845 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 AGAP1Q9UPQ3 857 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 SPOPO43791 374 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 GPR32O75388 356 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 CYBAP13498 195 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 H2AFXP16104 143 aaPredicted RBP15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 CD302Q8IX05 232 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 POLR2BP30876 1174 aaKnown RBP15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 GRM5P41594 1212 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 NT5DC3Q86UY8 548 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 UBL4BQ8N7F7 174 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 C1orf127Q8N9H9 656 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 TRPV1Q8NER1 839 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 CYFIP2Q96F07 1278 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 SNTG2Q9NY99 539 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 UVRAGQ9P2Y5 699 aa15.49■□□□□ 0.07
SHCBP1-201ENST00000303383 SEPT4O43236 478 aa15.48■□□□□ 0.07
SHCBP1-201ENST00000303383 HOXD10P28358 340 aa15.48■□□□□ 0.07
SHCBP1-201ENST00000303383 PPP1R2P3Q6NXS1 205 aa15.48■□□□□ 0.07
SHCBP1-201ENST00000303383 TAF2Q6P1X5 1199 aa15.48■□□□□ 0.07
SHCBP1-201ENST00000303383 NME8Q8N427 588 aa15.48■□□□□ 0.07
SHCBP1-201ENST00000303383 DPP3Q9NY33 737 aa15.48■□□□□ 0.07
SHCBP1-201ENST00000303383 MYADML2A6NDP7 307 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms