RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 TADA1Q96BN2 335 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 EPC1Q9H2F5 836 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 TUBE1Q9UJT0 475 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 OVOS2A0A0J9YW53 1432 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 OVOS2Q6IE36 1432 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 SNTNA6NMZ2 147 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 EXOSC10Q01780 885 aaKnown RBP8.01□□□□□ -1.13
SF3B3-201ENST00000302516 GPR141Q7Z602 305 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 RTKN2Q8IZC4 609 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 C1orf54Q8WWF1 131 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 ERP44Q9BS26 406 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 MYH3P11055 1940 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 TEX33O43247 280 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 ZNF211Q13398 564 aaPredicted RBP8.01□□□□□ -1.13
SF3B3-201ENST00000302516 JAMLQ86YT9 394 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 GLYCTKQ8IVS8 523 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 PPIL6Q8IXY8 311 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 CCDC126Q96EE4 140 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 CARD9Q9H257 536 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 LOC102724159A0A0B4J2E5 919 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 POLBP06746 335 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 PRLRP16471 622 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 PWP2Q15269 919 aaKnown RBP8.01□□□□□ -1.13
SF3B3-201ENST00000302516 PLEKHM3Q6ZWE6 761 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 ZFRQ96KR1 1074 aaKnown RBP8.01□□□□□ -1.13
SF3B3-201ENST00000302516 SH3GL2Q99962 352 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 FAM213AQ9BRX8 229 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 FAM192AQ9GZU8 254 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 NOD2Q9HC29 1040 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 RIC8BQ9NVN3 520 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 C3orf70A6NLC5 250 aaPredicted RBP8.01□□□□□ -1.13
SF3B3-201ENST00000302516 CLASP2O75122 1294 aaKnown RBP8.01□□□□□ -1.13
SF3B3-201ENST00000302516 CNTFP26441 200 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 IRAK1P51617 712 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 AARS2Q5JTZ9 985 aaKnown RBP8.01□□□□□ -1.13
SF3B3-201ENST00000302516 SZRD1Q7Z422 152 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 JADE3Q92613 823 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 RNF25Q96BH1 459 aaPredicted RBP8.01□□□□□ -1.13
SF3B3-201ENST00000302516 TUBGCP3Q96CW5 907 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 PGBD4Q96DM1 585 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 L2HGDHQ9H9P8 463 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 RBM12Q9NTZ6 932 aaKnown RBP8.01□□□□□ -1.13
SF3B3-201ENST00000302516 TPI1P60174 286 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 CCDC15Q0P6D6 951 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 LRRC14Q15048 493 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 PDK1Q15118 436 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 DOK7Q18PE1 504 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 FAM9CQ8IZT9 166 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 ATPAF2Q8N5M1 289 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 DDHD1Q8NEL9 900 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 SH3RF3Q8TEJ3 882 aaPredicted RBP8.01□□□□□ -1.13
SF3B3-201ENST00000302516 STMN3Q9NZ72 180 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 TM9SF1O15321 606 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 NPEPPSP55786 919 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 ACTR2P61160 394 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 TRIM16LQ309B1 348 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 PLA2G12BQ9BX93 195 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 HOXC10Q9NYD6 342 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 ZNF197O14709 1029 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 CALB2P22676 271 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 SKOR1P84550 965 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 TP53BP2Q13625 1128 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 LLGL1Q15334 1064 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 EAPPQ56P03 285 aaPredicted RBP8.01□□□□□ -1.13
SF3B3-201ENST00000302516 BTNL9Q6UXG8 535 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 PHF20Q9BVI0 1012 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 GRID1Q9ULK0 1009 aa8.01□□□□□ -1.13
SF3B3-201ENST00000302516 SLC16A4O15374 487 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 RAB14P61106 215 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 ZNF235Q14590 738 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 TTLL4Q14679 1199 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 SYCP2LQ5T4T6 812 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 CLEC4FQ8N1N0 589 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 FAM162AQ96A26 154 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 AGO2Q9UKV8 859 aaKnown RBP8□□□□□ -1.13
SF3B3-201ENST00000302516 FARP1Q9Y4F1 1045 aaPredicted RBP8□□□□□ -1.13
SF3B3-201ENST00000302516 MROH2AA6NES4 1674 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 ARIH2O95376 493 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 TMEM253P0C7T8 217 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 PTK6Q13882 451 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 TRIP10Q15642 601 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 USPL1Q5W0Q7 1092 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 ANKRD40Q6AI12 368 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 ERGIC2Q96RQ1 377 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 DNAJC7Q99615 494 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 DCP1AQ9NPI6 582 aaPredicted RBP8□□□□□ -1.13
SF3B3-201ENST00000302516 ARHGEF28Q8N1W1 1705 aaKnown RBP8□□□□□ -1.13
SF3B3-201ENST00000302516 PREX1Q8TCU6 1659 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 PSMA3P25788 255 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 CYB5D1Q6P9G0 228 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 TTC33Q6PID6 262 aaPredicted RBP8□□□□□ -1.13
SF3B3-201ENST00000302516 RRM2BQ7LG56 351 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 CCNJLQ8IV13 435 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 KLHL4Q9C0H6 718 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 ARHGEF38Q9NXL2 777 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 PNPLA6Q8IY17 1366 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 NQO1P15559 274 aaKnown RBP8□□□□□ -1.13
SF3B3-201ENST00000302516 ACADSBP45954 432 aa8□□□□□ -1.13
SF3B3-201ENST00000302516 TRMT5Q32P41 509 aaKnown RBP8□□□□□ -1.13
SF3B3-201ENST00000302516 OXER1Q8TDS5 423 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms