RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 LNX1Q8TBB1 728 aaPredicted RBP12.82□□□□□ -0.36
PDGFD-201ENST00000302251 NSL1Q96IY1 281 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 LRGUKQ96M69 825 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 GANQ9H2C0 597 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 DCLRE1BQ9H816 532 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 TRAF3IP3Q9Y228 551 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 HNRNPCP07910 306 aaKnown RBP eCLIP12.82□□□□□ -0.36
PDGFD-201ENST00000302251 CALB2P22676 271 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 CACNA2D1P54289 1103 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 MED21Q13503 144 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 CYTH1Q15438 398 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 PKN2Q16513 984 aaKnown RBP12.82□□□□□ -0.36
PDGFD-201ENST00000302251 TTC8Q8TAM2 541 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 RBM41Q96IZ5 413 aaKnown RBP12.82□□□□□ -0.36
PDGFD-201ENST00000302251 KIAA1683Q9H0B3 1180 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 DNAJC18Q9H819 358 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 MANSC1Q9H8J5 431 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 UVRAGQ9P2Y5 699 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 GGA2Q9UJY4 613 aa12.82□□□□□ -0.36
PDGFD-201ENST00000302251 PHLPP1O60346 1717 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 RREB1Q92766 1687 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 CCDC14Q49A88 953 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 MAP3K21Q5TCX8 1036 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 DUPD1Q68J44 220 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 CBWD2Q8IUF1 395 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 CCNYQ8ND76 341 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 MTMR9Q96QG7 549 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 TBC1D10AQ9BXI6 508 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 SLC9A2Q9UBY0 812 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 SLC12A6Q9UHW9 1150 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 LRP6O75581 1613 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 PLCH1Q4KWH8 1693 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 TCRBV7S2A1N4TA0A589 114 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 ESYT2A0FGR8 921 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 ZSCAN5DPP0CG00 497 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 ATP4AP20648 1035 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 ANXA13P27216 316 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 SERPINB3P29508 390 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 CHKAP35790 457 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 GSCP56915 257 aaPredicted RBP12.81□□□□□ -0.36
PDGFD-201ENST00000302251 LAMB3Q13751 1172 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 SNRNP35Q16560 246 aaKnown RBP12.81□□□□□ -0.36
PDGFD-201ENST00000302251 CEP55Q53EZ4 464 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 KRT80Q6KB66 452 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 RAPH1Q70E73 1250 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 FITM2Q8N6M3 262 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 SPOCK2Q92563 424 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 HAS1Q92839 578 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 HIC2Q96JB3 615 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 FAM81BQ96LP2 452 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 VPS11Q9H270 941 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 C2CD2Q9Y426 696 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.81□□□□□ -0.36
PDGFD-201ENST00000302251 NUP98P52948 1817 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 K7ERI5 159 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 C1orf228Q6PIY5 440 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 MORC4Q8TE76 937 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 STK32AQ8WU08 396 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 PIK3R5Q8WYR1 880 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 NMD3Q96D46 503 aaKnown RBP12.81□□□□□ -0.36
PDGFD-201ENST00000302251 PPP1R16BQ96T49 567 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 C10orf88Q9H8K7 445 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 PSMC3IPQ9P2W1 217 aaPredicted RBP12.81□□□□□ -0.36
PDGFD-201ENST00000302251 AGAP1Q9UPQ3 857 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 CHD4Q14839 1912 aa12.81□□□□□ -0.36
PDGFD-201ENST00000302251 GJB6O95452 261 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 ZBED1O96006 694 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 PPATQ06203 517 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 DYNC1I2Q13409 638 aaKnown RBP12.8□□□□□ -0.36
PDGFD-201ENST00000302251 SPRED3Q2MJR0 410 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 PLA2G4FQ68DD2 849 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 ARHGAP27Q6ZUM4 889 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 PALB2Q86YC2 1186 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 THNSL1Q8IYQ7 743 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 DEPDC1BQ8WUY9 529 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 RANBP17Q9H2T7 1088 aaKnown RBP12.8□□□□□ -0.36
PDGFD-201ENST00000302251 TOPORSQ9NS56 1045 aaPredicted RBP12.8□□□□□ -0.36
PDGFD-201ENST00000302251 SEL1LQ9UBV2 794 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 NARFQ9UHQ1 456 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 CNOT7Q9UIV1 285 aaKnown RBP12.8□□□□□ -0.36
PDGFD-201ENST00000302251 MMP13P45452 471 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 PTDSS1P48651 473 aaKnown RBP12.8□□□□□ -0.36
PDGFD-201ENST00000302251 DLGAP5Q15398 846 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 KLHL38Q2WGJ6 581 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 KCNT1Q5JUK3 1230 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 ARMC3Q5W041 872 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 PCNX4Q63HM2 1172 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 OR6B2Q6IFH4 312 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 ARHGEF19Q8IW93 802 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 TRIM42Q8IWZ5 723 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 SCG3Q8WXD2 468 aaKnown RBP12.8□□□□□ -0.36
PDGFD-201ENST00000302251 FAM84AQ96KN4 292 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 TMEM121Q9BTD3 319 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 RNPEPL1Q9HAU8 725 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.8□□□□□ -0.36
PDGFD-201ENST00000302251 SCINQ9Y6U3 715 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 BCORQ6W2J9 1755 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 NDUFB10O96000 172 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 MYL2P10916 166 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 RRP1BQ14684 758 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms