RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 ZNF317Q96PQ6 595 aaPredicted RBP13.74□□□□□ -0.21
HIF3A-204ENST00000300862 CNOT7Q9UIV1 285 aaKnown RBP13.74□□□□□ -0.21
HIF3A-204ENST00000300862 C5orf60A6NFR6 353 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 GBP1P32455 592 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 RDXP35241 583 aaKnown RBP13.73□□□□□ -0.21
HIF3A-204ENST00000300862 ADCY8P40145 1251 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 CNTN2Q02246 1040 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 STRN3Q13033 797 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 PSMD6Q15008 389 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 KYNUQ16719 465 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 ATP13A4Q4VNC1 1196 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 CYB5D1Q6P9G0 228 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 FAM43BQ6ZT52 329 aaPredicted RBP13.73□□□□□ -0.21
HIF3A-204ENST00000300862 SEPT14Q6ZU15 432 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 LRRC34Q8IZ02 419 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 SCYL3Q8IZE3 742 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 FUKQ8N0W3 1084 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 PLVAPQ9BX97 442 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 ACTR5Q9H9F9 607 aaPredicted RBP13.73□□□□□ -0.21
HIF3A-204ENST00000300862 PICK1Q9NRD5 415 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 HAUS2Q9NVX0 235 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 RBAKQ9NYW8 714 aaPredicted RBP13.73□□□□□ -0.21
HIF3A-204ENST00000300862 PIM2Q9P1W9 311 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 FBXO40Q9UH90 709 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 SUFUQ9UMX1 484 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 TNS1Q9HBL0 1735 aaKnown RBP13.73□□□□□ -0.21
HIF3A-204ENST00000300862 TTLL13PA6NNM8 815 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 AGTP01019 485 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 ACO1P21399 889 aaKnown RBP13.73□□□□□ -0.21
HIF3A-204ENST00000300862 GLRA2P23416 452 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 IVDP26440 423 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 ZNF280AP59817 542 aaPredicted RBP13.73□□□□□ -0.21
HIF3A-204ENST00000300862 XRRA1Q6P2D8 792 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 MON1BQ7L1V2 547 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 ENOSF1Q7L5Y1 443 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 EXOC3L1Q86VI1 746 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 DEPTORQ8TB45 409 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 DCLK3Q9C098 648 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 ADAM22Q9P0K1 906 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 CEP83Q9Y592 693 aa13.73□□□□□ -0.21
HIF3A-204ENST00000300862 PI4K2BG5E9Z4 385 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 K7ERI5 159 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 MAFGO15525 162 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 CYP1A1P04798 512 aaPredicted RBP13.72□□□□□ -0.21
HIF3A-204ENST00000300862 VIMP08670 466 aaKnown RBP13.72□□□□□ -0.21
HIF3A-204ENST00000300862 SUPT20HL2P0C7V6 817 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 TCF4P15884 667 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 GNA15P30679 374 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 ELF1P32519 619 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 CUL2Q13617 745 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 SUPT20HL1Q3ZLR7 823 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 XKR3Q5GH77 459 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 MIS18BP1Q6P0N0 1132 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 C3orf20Q8ND61 904 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 GIMAP7Q8NHV1 300 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 TACO1Q9BSH4 297 aaKnown RBP13.72□□□□□ -0.21
HIF3A-204ENST00000300862 NUB1Q9Y5A7 615 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 COL11A1P12107 1806 aaPredicted RBP13.72□□□□□ -0.21
HIF3A-204ENST00000300862 SPATA31C2B4DYI2 1134 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 NFKBIEO00221 500 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 THAP12O43422 761 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 CENPCQ03188 943 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 ADCY1Q08828 1119 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 MAMLD1Q13495 774 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 SNCBQ16143 134 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 ZFYVE27Q5T4F4 411 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 KAZNQ674X7 775 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 PARP9Q8IXQ6 854 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 RUNDC3BQ96NL0 473 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 ELAC2Q9BQ52 826 aaKnown RBP13.72□□□□□ -0.21
HIF3A-204ENST00000300862 MSTO1Q9BUK6 570 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 AVENQ9NQS1 362 aaPredicted RBP13.72□□□□□ -0.21
HIF3A-204ENST00000300862 WHRNQ9P202 907 aa13.72□□□□□ -0.21
HIF3A-204ENST00000300862 DKC1O60832 514 aaKnown RBP eCLIP13.71□□□□□ -0.21
HIF3A-204ENST00000300862 ZC3H11AO75152 810 aaKnown RBP eCLIP13.71□□□□□ -0.21
HIF3A-204ENST00000300862 PROSCO94903 275 aa13.71□□□□□ -0.21
HIF3A-204ENST00000300862 IBSPP21815 317 aaPredicted RBP13.71□□□□□ -0.21
HIF3A-204ENST00000300862 NOMO3P69849 1222 aa13.71□□□□□ -0.21
HIF3A-204ENST00000300862 ZNF394Q53GI3 561 aa13.71□□□□□ -0.21
HIF3A-204ENST00000300862 RHBDF2Q6PJF5 856 aa13.71□□□□□ -0.21
HIF3A-204ENST00000300862 TAX1BP1Q86VP1 789 aa13.71□□□□□ -0.21
HIF3A-204ENST00000300862 RBBP8NLQ8NC74 664 aaPredicted RBP13.71□□□□□ -0.21
HIF3A-204ENST00000300862 CENPTQ96BT3 561 aa13.71□□□□□ -0.21
HIF3A-204ENST00000300862 SNF8Q96H20 258 aa13.71□□□□□ -0.21
HIF3A-204ENST00000300862 TEX13BQ9BXU2 312 aa13.71□□□□□ -0.21
HIF3A-204ENST00000300862 VPS33BQ9H267 617 aa13.71□□□□□ -0.21
HIF3A-204ENST00000300862 ACAD9Q9H845 621 aa13.71□□□□□ -0.21
HIF3A-204ENST00000300862 ZNF302Q9NR11 478 aa13.71□□□□□ -0.21
HIF3A-204ENST00000300862 TBK1Q9UHD2 729 aa13.71□□□□□ -0.21
HIF3A-204ENST00000300862 TPX2Q9ULW0 747 aaKnown RBP13.71□□□□□ -0.21
HIF3A-204ENST00000300862 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.71□□□□□ -0.21
HIF3A-204ENST00000300862 MYH9P35579 1960 aaKnown RBP13.71□□□□□ -0.21
HIF3A-204ENST00000300862 KRT10P13645 584 aa13.71□□□□□ -0.22
HIF3A-204ENST00000300862 ATF2P15336 505 aa13.71□□□□□ -0.22
HIF3A-204ENST00000300862 SCTRP47872 440 aa13.71□□□□□ -0.22
HIF3A-204ENST00000300862 RTP1P59025 263 aa13.71□□□□□ -0.22
HIF3A-204ENST00000300862 RPL7AP62424 266 aaKnown RBP13.71□□□□□ -0.22
HIF3A-204ENST00000300862 CLDN10P78369 228 aa13.71□□□□□ -0.22
HIF3A-204ENST00000300862 CNGA2Q16280 664 aa13.71□□□□□ -0.22
HIF3A-204ENST00000300862 ABRAQ8N0Z2 381 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms