RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 CFHP08603 1231 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 RALAP11233 206 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 ATP4AP20648 1035 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 PPP1R15BQ5SWA1 713 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 TAOK1Q7L7X3 1001 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 C4orf19Q8IY42 314 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 TTLL6Q8N841 843 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 EZH1Q92800 747 aaPredicted RBP14.29□□□□□ -0.12
CTDP1-202ENST00000299543 HAUS1Q96CS2 278 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 HERPUD2Q9BSE4 406 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 PAPOLBQ9NRJ5 636 aaKnown RBP14.29□□□□□ -0.12
CTDP1-202ENST00000299543 SLC5A4Q9NY91 659 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 PCDHA10Q9Y5I2 948 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 LRRIQ4A6NIV6 560 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 TCP11X1B4DZS4 312 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 ATF2P15336 505 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 ATF7P17544 494 aaPredicted RBP14.29□□□□□ -0.12
CTDP1-202ENST00000299543 PIK3CAP42336 1068 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 ALDH5A1P51649 535 aaPredicted RBP14.29□□□□□ -0.12
CTDP1-202ENST00000299543 DRG2P55039 364 aaKnown RBP14.29□□□□□ -0.12
CTDP1-202ENST00000299543 NUGGCQ68CJ6 796 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 USP37Q86T82 979 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 PGM2Q96G03 612 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 L3MBTL3Q96JM7 780 aaPredicted RBP14.29□□□□□ -0.12
CTDP1-202ENST00000299543 ZBTB45Q96K62 511 aaPredicted RBP14.29□□□□□ -0.12
CTDP1-202ENST00000299543 RNF146Q9NTX7 359 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 FGFR1OP2Q9NVK5 253 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 UVRAGQ9P2Y5 699 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 PCDHB4Q9Y5E5 795 aa14.29□□□□□ -0.12
CTDP1-202ENST00000299543 ZNF862O60290 1169 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 EGFRP00533 1210 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 AGTP01019 485 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 CYP1A2P05177 515 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 MMP13P45452 471 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 PAPOLAP51003 745 aaKnown RBP14.28□□□□□ -0.12
CTDP1-202ENST00000299543 CYP24A1Q07973 514 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 SLC39A4Q6P5W5 647 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 EXOC3L1Q86VI1 746 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 VTI1AQ96AJ9 217 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 ACSF2Q96CM8 615 aaPredicted RBP14.28□□□□□ -0.12
CTDP1-202ENST00000299543 IFT74Q96LB3 600 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 ADAM7Q9H2U9 754 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.28□□□□□ -0.129e-7■■■■□ 25.7
CTDP1-202ENST00000299543 ZMYND8Q9ULU4 1186 aaPredicted RBP14.28□□□□□ -0.12
CTDP1-202ENST00000299543 ADGRA3Q8IWK6 1321 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 TMEM120BA0PK00 339 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 GAS8O95995 478 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 NR3C2P08235 984 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 NEFHP12036 1026 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 PLCB3Q01970 1234 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 MTM1Q13496 603 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 PRKG1Q13976 671 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 BRDTQ58F21 947 aaPredicted RBP14.28□□□□□ -0.12
CTDP1-202ENST00000299543 NIM1KQ8IY84 436 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 SRRM1Q8IYB3 904 aaKnown RBP14.28□□□□□ -0.12
CTDP1-202ENST00000299543 GPD1LQ8N335 351 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 MAGEC3Q8TD91 643 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 CD101Q93033 1021 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 OCEL1Q9H607 264 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.28□□□□□ -0.12
CTDP1-202ENST00000299543 LTBP1Q14766 1721 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 PCNTO95613 3336 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 CCT8L1PA6NM43 557 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 NCKAP1LP55160 1127 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 TAF11Q15544 211 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 CLEC16AQ2KHT3 1053 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 SLC5A9Q2M3M2 681 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 ATP13A4Q4VNC1 1196 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 ART4Q93070 314 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 TCHPQ9BT92 498 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 STMN4Q9H169 189 aaPredicted RBP14.28□□□□□ -0.12
CTDP1-202ENST00000299543 PXMP2Q9NR77 195 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 ADAM22Q9P0K1 906 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 ATP8B3O60423 1300 aa14.28□□□□□ -0.12
CTDP1-202ENST00000299543 GGPS1O95749 300 aa14.27□□□□□ -0.12
CTDP1-202ENST00000299543 JAK3P52333 1124 aa14.27□□□□□ -0.12
CTDP1-202ENST00000299543 KRT76Q01546 638 aa14.27□□□□□ -0.12
CTDP1-202ENST00000299543 DRP2Q13474 957 aa14.27□□□□□ -0.12
CTDP1-202ENST00000299543 MAP4K3Q8IVH8 894 aa14.27□□□□□ -0.12
CTDP1-202ENST00000299543 RUNDC3BQ96NL0 473 aa14.27□□□□□ -0.12
CTDP1-202ENST00000299543 MOV10L1Q9BXT6 1211 aaKnown RBP14.27□□□□□ -0.12
CTDP1-202ENST00000299543 POLR3FQ9H1D9 316 aaPredicted RBP14.27□□□□□ -0.12
CTDP1-202ENST00000299543 HOMER3Q9NSC5 361 aa14.27□□□□□ -0.12
CTDP1-202ENST00000299543 HLA-DRAP01903 254 aa14.27□□□□□ -0.13
CTDP1-202ENST00000299543 FAM163BP0C2L3 166 aa14.27□□□□□ -0.13
CTDP1-202ENST00000299543 MAPTP10636 758 aaKnown RBP14.27□□□□□ -0.13
CTDP1-202ENST00000299543 KRT10P13645 584 aa14.27□□□□□ -0.13
CTDP1-202ENST00000299543 GPC3P51654 580 aa14.27□□□□□ -0.13
CTDP1-202ENST00000299543 HADHBP55084 474 aaKnown RBP14.27□□□□□ -0.13
CTDP1-202ENST00000299543 SIX1Q15475 284 aaPredicted RBP14.27□□□□□ -0.13
CTDP1-202ENST00000299543 C12orf56Q8IXR9 622 aa14.27□□□□□ -0.13
CTDP1-202ENST00000299543 MCOLN2Q8IZK6 566 aa14.27□□□□□ -0.13
CTDP1-202ENST00000299543 ATXN2LQ8WWM7 1075 aaKnown RBP14.27□□□□□ -0.13
CTDP1-202ENST00000299543 ZNF668Q96K58 619 aaPredicted RBP14.27□□□□□ -0.13
CTDP1-202ENST00000299543 SLC38A10Q9HBR0 1119 aa14.27□□□□□ -0.13
CTDP1-202ENST00000299543 WDR46O15213 610 aaKnown RBP14.26□□□□□ -0.13
CTDP1-202ENST00000299543 GH1P01241 217 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 BRAFP15056 766 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 CXCL9Q07325 125 aa14.26□□□□□ -0.13
CTDP1-202ENST00000299543 CWF19L1Q69YN2 538 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms