RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 B2RBV5 119 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 CES2O00748 559 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 USP1O94782 785 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 CD58P19256 250 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 RPA3P35244 121 aaPredicted RBP15.74■□□□□ 0.11
SPIDR-201ENST00000297423 FAM81AQ8TBF8 368 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 SLC35C1Q96A29 364 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 CYP4F11Q9HBI6 524 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 HOMER2Q9NSB8 354 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 TYW1Q9NV66 732 aaKnown RBP15.74■□□□□ 0.11
SPIDR-201ENST00000297423 NINJ2Q9NZG7 142 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 LRCH1Q9Y2L9 728 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 TNS1Q9HBL0 1735 aaKnown RBP15.74■□□□□ 0.11
SPIDR-201ENST00000297423 PALM3A6NDB9 673 aaPredicted RBP15.74■□□□□ 0.11
SPIDR-201ENST00000297423 A6NHS1 94 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 ATP2A1O14983 1001 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 ZBTB39O15060 712 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 PYGBP11216 843 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 HSPA6P17066 643 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 IDI2Q9BXS1 227 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 ENTPD3O75355 529 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 EPHA7Q15375 998 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 P3H1Q32P28 736 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 RGS9BPQ6ZS82 235 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 UBE2OQ9C0C9 1292 aaKnown RBP15.74■□□□□ 0.11
SPIDR-201ENST00000297423 DNAJC18Q9H819 358 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 CLIC5Q9NZA1 410 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 SH3BP1Q9Y3L3 701 aa15.74■□□□□ 0.11
SPIDR-201ENST00000297423 KRT4P19013 534 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 SHMT1P34896 483 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
SPIDR-201ENST00000297423 CBWD6Q4V339 395 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 CBWD3Q5JTY5 395 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 CBWD5Q5RIA9 395 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 RASSF3Q86WH2 238 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 PASD1Q8IV76 773 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 GRAMD1AQ96CP6 724 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 STK33Q9BYT3 514 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 TRIM55Q9BYV6 548 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 SLX4Q8IY92 1834 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 C10orf71Q711Q0 1435 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 SLURP2P0DP57 97 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 ATP6V1B1P15313 513 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 MKRN3Q13064 507 aaKnown RBP15.73■□□□□ 0.11
SPIDR-201ENST00000297423 PDIA5Q14554 519 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 CENPKQ9BS16 269 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 WDR35Q9P2L0 1181 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 MAGEA13PA6NCF6 341 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 HNRNPRO43390 633 aaKnown RBP15.73■□□□□ 0.11
SPIDR-201ENST00000297423 SGPL1O95470 568 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 PTPN4P29074 926 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 GCLCP48506 637 aaPredicted RBP15.73■□□□□ 0.11
SPIDR-201ENST00000297423 GABPAQ06546 454 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 GPATCH4Q5T3I0 446 aaKnown RBP15.73■□□□□ 0.11
SPIDR-201ENST00000297423 ASAP3Q8TDY4 903 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 ACSF2Q96CM8 615 aaPredicted RBP15.73■□□□□ 0.11
SPIDR-201ENST00000297423 RBM41Q96IZ5 413 aaKnown RBP15.73■□□□□ 0.11
SPIDR-201ENST00000297423 FAM198AQ9UFP1 575 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 DIS3Q9Y2L1 958 aaKnown RBP15.73■□□□□ 0.11
SPIDR-201ENST00000297423 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.73■□□□□ 0.11
SPIDR-201ENST00000297423 EMSYQ7Z589 1322 aa15.73■□□□□ 0.11
SPIDR-201ENST00000297423 CCDC22O60826 627 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 BANF1O75531 89 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 MAGEA4P43358 317 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 IRGCQ6NXR0 463 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 CATSPER3Q86XQ3 398 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 OPTNQ96CV9 577 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 MTMR9Q96QG7 549 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 SYNCQ9H7C4 482 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 LMNAP02545 664 aaKnown RBP15.72■□□□□ 0.11
SPIDR-201ENST00000297423 VCAM1P19320 739 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 TPP2P29144 1249 aaPredicted RBP15.72■□□□□ 0.11
SPIDR-201ENST00000297423 BBS9Q3SYG4 887 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 SLFN13Q68D06 897 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 TMEM179Q6ZVK1 233 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 ST13P4Q8IZP2 240 aaPredicted RBP15.72■□□□□ 0.11
SPIDR-201ENST00000297423 RAB3IL1Q8TBN0 382 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 SLC26A7Q8TE54 656 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 CLPTM1LQ96KA5 538 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 DNAJC1Q96KC8 554 aaKnown RBP15.72■□□□□ 0.11
SPIDR-201ENST00000297423 PCMTD2Q9NV79 361 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 NDE1Q9NXR1 346 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.72■□□□□ 0.11
SPIDR-201ENST00000297423 GJB6O95452 261 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 ZSCAN5DPP0CG00 497 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 CETPP11597 493 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 NEK3P51956 506 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 ZCWPW2Q504Y3 356 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 LLGL2Q6P1M3 1020 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 PPP4R3CPQ6ZMV5 832 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 PALM2Q8IXS6 379 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.72■□□□□ 0.11
SPIDR-201ENST00000297423 VPS33BQ9H267 617 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 GINM1Q9NU53 330 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 GALNT8Q9NY28 637 aa15.72■□□□□ 0.11
SPIDR-201ENST00000297423 DNAJC6O75061 913 aa15.71■□□□□ 0.11
SPIDR-201ENST00000297423 PGM3O95394 542 aa15.71■□□□□ 0.11
SPIDR-201ENST00000297423 PTGIRP43119 386 aa15.71■□□□□ 0.11
SPIDR-201ENST00000297423 ATXN3P54252 364 aaPredicted RBP15.71■□□□□ 0.11
SPIDR-201ENST00000297423 WDR4P57081 412 aaKnown RBP15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms