RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 NSFP46459 744 aaKnown RBP12.57□□□□□ -0.4
RHO-201ENST00000296271 MAGOHP61326 146 aaKnown RBP12.57□□□□□ -0.4
RHO-201ENST00000296271 LAMTOR4Q0VGL1 99 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 SLC29A2Q14542 456 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 EEF1DP3Q658K8 133 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 KDM7AQ6ZMT4 941 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 SULF1Q8IWU6 871 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 GPR20Q99678 358 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 PPANQ9NQ55 473 aaKnown RBP12.57□□□□□ -0.4
RHO-201ENST00000296271 RNF181Q9P0P0 153 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 PPFIA2O75334 1257 aa12.56□□□□□ -0.4
RHO-201ENST00000296271 MAFO75444 373 aaPredicted RBP12.56□□□□□ -0.4
RHO-201ENST00000296271 RAP1GAPP47736 663 aa12.56□□□□□ -0.4
RHO-201ENST00000296271 NOMO3P69849 1222 aa12.56□□□□□ -0.4
RHO-201ENST00000296271 IRX5P78411 483 aaPredicted RBP12.56□□□□□ -0.4
RHO-201ENST00000296271 MKRN3Q13064 507 aaKnown RBP12.56□□□□□ -0.4
RHO-201ENST00000296271 TXNRD3NBQ6F5E7 133 aa12.56□□□□□ -0.4
RHO-201ENST00000296271 SEPT1Q8WYJ6 367 aa12.56□□□□□ -0.4
RHO-201ENST00000296271 VTI1AQ96AJ9 217 aa12.56□□□□□ -0.4
RHO-201ENST00000296271 DCPSQ96C86 337 aaKnown RBP12.56□□□□□ -0.4
RHO-201ENST00000296271 RAB17Q9H0T7 212 aa12.56□□□□□ -0.4
RHO-201ENST00000296271 ADAM22Q9P0K1 906 aa12.56□□□□□ -0.4
RHO-201ENST00000296271 UVRAGQ9P2Y5 699 aa12.56□□□□□ -0.4
RHO-201ENST00000296271 DIS3Q9Y2L1 958 aaKnown RBP12.56□□□□□ -0.4
RHO-201ENST00000296271 USP37Q86T82 979 aa12.56□□□□□ -0.4
RHO-201ENST00000296271 DDX27Q96GQ7 796 aaKnown RBP12.56□□□□□ -0.4
RHO-201ENST00000296271 NAP1L3Q99457 506 aaPredicted RBP12.56□□□□□ -0.4
RHO-201ENST00000296271 CGRRF1Q99675 332 aa12.56□□□□□ -0.4
RHO-201ENST00000296271 DDX23Q9BUQ8 820 aaKnown RBP12.56□□□□□ -0.4
RHO-201ENST00000296271 RNPEPQ9H4A4 650 aa12.56□□□□□ -0.4
RHO-201ENST00000296271 EFCC1Q9HA90 598 aa12.56□□□□□ -0.4
RHO-201ENST00000296271 NRBP2Q9NSY0 501 aa12.56□□□□□ -0.4
RHO-201ENST00000296271 PCYOX1Q9UHG3 505 aa12.56□□□□□ -0.4
RHO-201ENST00000296271 POLIQ9UNA4 740 aa12.56□□□□□ -0.4
RHO-201ENST00000296271 PIGRP01833 764 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 IVLP07476 585 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 RALAP11233 206 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 KRT10P13645 584 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 CHRNA3P32297 505 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 CHKAP35790 457 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 PMS2P54278 862 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 IFI35P80217 286 aaPredicted RBP12.55□□□□□ -0.4
RHO-201ENST00000296271 TFAMQ00059 246 aaKnown RBP12.55□□□□□ -0.4
RHO-201ENST00000296271 CENPCQ03188 943 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 PTP4A2Q12974 167 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 MAMLD1Q13495 774 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 SGO2Q562F6 1265 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 ODF2Q5BJF6 829 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 METTL7BQ6UX53 244 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 CCDC50Q8IVM0 306 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 EFCAB13Q8IY85 973 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 ABRAQ8N0Z2 381 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 TFAP2BQ92481 460 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 A0A0G2JLL6 359 aaPredicted RBP12.55□□□□□ -0.4
RHO-201ENST00000296271 TULP2O00295 520 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 ABLIM1O14639 778 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 MDH1P40925 334 aaKnown RBP12.55□□□□□ -0.4
RHO-201ENST00000296271 CDH8P55286 799 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 IFFO1Q0D2I5 559 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 MOGSQ13724 837 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 DHX34Q14147 1143 aaKnown RBP12.55□□□□□ -0.4
RHO-201ENST00000296271 PLCB4Q15147 1175 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 CCDC38Q502W7 563 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 CYP4A22Q5TCH4 519 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 PRRT2Q7Z6L0 340 aaPredicted RBP12.55□□□□□ -0.4
RHO-201ENST00000296271 EIF1ADQ8N9N8 165 aaKnown RBP12.55□□□□□ -0.4
RHO-201ENST00000296271 C1orf131Q8NDD1 294 aaKnown RBP12.55□□□□□ -0.4
RHO-201ENST00000296271 EPS8L3Q8TE67 593 aaKnown RBP12.55□□□□□ -0.4
RHO-201ENST00000296271 ZNF606Q8WXB4 792 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 BBXQ8WY36 941 aaPredicted RBP12.55□□□□□ -0.4
RHO-201ENST00000296271 SPATA33Q96N06 139 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 ACO2Q99798 780 aaKnown RBP12.55□□□□□ -0.4
RHO-201ENST00000296271 FHDC1Q9C0D6 1143 aaPredicted RBP12.55□□□□□ -0.4
RHO-201ENST00000296271 CCDC113Q9H0I3 377 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 AZI2Q9H6S1 392 aa12.55□□□□□ -0.4
RHO-201ENST00000296271 LOC285556D6RIA3 1793 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 FAM187AA6NFU0 413 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 GOLGA6L10A6NI86 522 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 INO80B-WBP1J3KQ70 363 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 NOP56O00567 594 aaKnown RBP12.54□□□□□ -0.4
RHO-201ENST00000296271 MEFVO15553 781 aaPredicted RBP12.54□□□□□ -0.4
RHO-201ENST00000296271 SBF1O95248 1867 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 PRKCBP05771 671 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 GJA5P36382 358 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 OGDHQ02218 1023 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 KRT17Q04695 432 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 ZNF252P-AS1Q0IIN9 211 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 LRIG3Q6UXM1 1119 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 GLIS1Q8NBF1 620 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 INO80BQ9C086 356 aaPredicted RBP12.54□□□□□ -0.4
RHO-201ENST00000296271 KIAA1586Q9HCI6 787 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 AAASQ9NRG9 546 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 RNF19AQ9NV58 838 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 CWC15Q9P013 229 aaKnown RBP12.54□□□□□ -0.4
RHO-201ENST00000296271 NXF1Q9UBU9 619 aaKnown RBP12.54□□□□□ -0.4
RHO-201ENST00000296271 PPP2R3BQ9Y5P8 575 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 HMGB1P1B2RPK0 211 aaPredicted RBP12.54□□□□□ -0.4
RHO-201ENST00000296271 NDUFAB1O14561 156 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 FSCN2O14926 492 aa12.54□□□□□ -0.4
RHO-201ENST00000296271 ZC3H11AO75152 810 aaKnown RBP eCLIP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms