RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 SEMA3FQ13275 785 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 XKR3Q5GH77 459 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 C3orf67Q6ZVT6 689 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 SH3GL3Q99963 347 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 DONSONQ9NYP3 566 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 FZD1Q9UP38 647 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 PFDN6O15212 129 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 CPP00450 1065 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 MX2P20592 715 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 CDK17Q00537 523 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 CACNB2Q08289 660 aaPredicted RBP14.17□□□□□ -0.14
HPS3-201ENST00000296051 CRYMQ14894 314 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 VEPH1Q14D04 833 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 EPHA7Q15375 998 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 AADACL2Q6P093 401 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 HAUS6Q7Z4H7 955 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 SLC26A7Q8TE54 656 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 GTF3C2Q8WUA4 911 aaPredicted RBP14.17□□□□□ -0.14
HPS3-201ENST00000296051 ABCF3Q9NUQ8 709 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 ANGPTL2Q9UKU9 493 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 AGPSO00116 658 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 KIF3CO14782 793 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 ZNF263O14978 683 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 TADA2AO75478 443 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 GMNNO75496 209 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 ENO1P06733 434 aaKnown RBP14.17□□□□□ -0.14
HPS3-201ENST00000296051 PGM1P36871 562 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 GPC3P51654 580 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 POTEAQ6S8J7 498 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 CATSPER3Q86XQ3 398 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 LRRC71Q8N4P6 559 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 DNAJC9Q8WXX5 260 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 METTL5Q9NRN9 209 aaKnown RBP14.17□□□□□ -0.14
HPS3-201ENST00000296051 HEY1Q9Y5J3 304 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 USP32Q8NFA0 1604 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 A8MXQ7 604 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 FSBPO95073 299 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 YWHABP31946 246 aaKnown RBP14.17□□□□□ -0.14
HPS3-201ENST00000296051 CTCFP49711 727 aaPredicted RBP14.17□□□□□ -0.14
HPS3-201ENST00000296051 BACE1P56817 501 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 SCFD1Q8WVM8 642 aa14.17□□□□□ -0.14
HPS3-201ENST00000296051 PPLO60437 1756 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 FAM47DPA6NHR8 397 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 PPFIA2O75334 1257 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 RABGAP1LQ5R372 815 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 TMC3Q7Z5M5 1100 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 PLEKHH3Q7Z736 793 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 PCGF5Q86SE9 256 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 PDCD6IPQ8WUM4 868 aaKnown RBP14.16□□□□□ -0.14
HPS3-201ENST00000296051 ACSF2Q96CM8 615 aaPredicted RBP14.16□□□□□ -0.14
HPS3-201ENST00000296051 CARD9Q9H257 536 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 KDM6AO15550 1401 aaPredicted RBP14.16□□□□□ -0.14
HPS3-201ENST00000296051 DCDC2CA8MYV0 355 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 MED24O75448 989 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 MOCS2O96007 188 aaPredicted RBP14.16□□□□□ -0.14
HPS3-201ENST00000296051 CIITAP33076 1130 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 SERPINB4P48594 390 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 EDRF1Q3B7T1 1238 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 MEGF6O75095 1541 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 DDTLA6NHG4 134 aaPredicted RBP14.16□□□□□ -0.14
HPS3-201ENST00000296051 SPECC1L-ADORA2AF8WAN1 911 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 WNT10BO00744 389 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 TRAPPC3O43617 180 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 TJP3O95049 919 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 TMEM253P0C7T8 217 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 QPCTQ16769 361 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 TKFCQ3LXA3 575 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 CHST13Q8NET6 341 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 ATL2Q8NHH9 583 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 TRIM11Q96F44 468 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 FAM81BQ96LP2 452 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 ZDHHC15Q96MV8 337 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 KIAA1586Q9HCI6 787 aa14.16□□□□□ -0.14
HPS3-201ENST00000296051 FOXP2O15409 715 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 SHBGP04278 402 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 ZCCHC18P0CG32 403 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 FGFR2P21802 821 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 ARL4CP56559 192 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 NOP14P78316 857 aaKnown RBP14.15□□□□□ -0.14
HPS3-201ENST00000296051 ASPHQ12797 758 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 ST13P4Q8IZP2 240 aaPredicted RBP14.15□□□□□ -0.14
HPS3-201ENST00000296051 MCUQ8NE86 351 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 TTC25Q96NG3 672 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 PI4K2AQ9BTU6 479 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 SHCBP1LQ9BZQ2 653 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 JMJD4Q9H9V9 463 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 PRG3Q9Y2Y8 225 aaPredicted RBP14.15□□□□□ -0.14
HPS3-201ENST00000296051 PITPNM2Q9BZ72 1349 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 KCNA3P22001 575 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 COILP38432 576 aaPredicted RBP14.15□□□□□ -0.14
HPS3-201ENST00000296051 PSMC6P62333 389 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 IRX1P78414 480 aaPredicted RBP14.15□□□□□ -0.14
HPS3-201ENST00000296051 DBN1Q16643 649 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 ARL13BQ3SXY8 428 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 GLB1LQ6UWU2 654 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 TMEM237Q96Q45 408 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 TAAR1Q96RJ0 339 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 SPON2Q9BUD6 331 aa14.15□□□□□ -0.14
HPS3-201ENST00000296051 CDC42EP4Q9H3Q1 356 aaKnown RBP14.15□□□□□ -0.14
HPS3-201ENST00000296051 GDF3Q9NR23 364 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms