RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 C3orf58Q8NDZ4 430 aa24.38■■□□□ 1.49
LINC01116-201ENST00000295549 FBXO22Q8NEZ5 403 aa24.38■■□□□ 1.49
LINC01116-201ENST00000295549 BCL7CQ8WUZ0 217 aaPredicted RBP24.38■■□□□ 1.49
LINC01116-201ENST00000295549 TMEM169Q96HH4 297 aa24.38■■□□□ 1.49
LINC01116-201ENST00000295549 TSPY26PQ9H489 355 aa24.38■■□□□ 1.49
LINC01116-201ENST00000295549 TMEM8AQ9HCN3 771 aa24.38■■□□□ 1.49
LINC01116-201ENST00000295549 MAGEC2Q9UBF1 373 aaPredicted RBP24.38■■□□□ 1.49
LINC01116-201ENST00000295549 STK39Q9UEW8 545 aa24.38■■□□□ 1.49
LINC01116-201ENST00000295549 H3BNC9 293 aa24.37■■□□□ 1.49
LINC01116-201ENST00000295549 TADA2AO75478 443 aa24.37■■□□□ 1.49
LINC01116-201ENST00000295549 EFEMP2O95967 443 aa24.37■■□□□ 1.49
LINC01116-201ENST00000295549 ITGB1P05556 798 aa24.37■■□□□ 1.49
LINC01116-201ENST00000295549 EEF1GP26641 437 aaKnown RBP24.37■■□□□ 1.49
LINC01116-201ENST00000295549 GCLMP48507 274 aa24.37■■□□□ 1.49
LINC01116-201ENST00000295549 ARNTL2Q8WYA1 636 aa24.37■■□□□ 1.49
LINC01116-201ENST00000295549 HSD3B7Q9H2F3 369 aa24.37■■□□□ 1.49
LINC01116-201ENST00000295549 TTYH1Q9H313 450 aaPredicted RBP24.37■■□□□ 1.49
LINC01116-201ENST00000295549 CERS4Q9HA82 394 aa24.37■■□□□ 1.49
LINC01116-201ENST00000295549 CBX8Q9HC52 389 aa24.37■■□□□ 1.49
LINC01116-201ENST00000295549 AGAP1Q9UPQ3 857 aa24.37■■□□□ 1.49
LINC01116-201ENST00000295549 LZTS1Q9Y250 596 aa24.37■■□□□ 1.49
LINC01116-201ENST00000295549 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.37■■□□□ 1.49
LINC01116-201ENST00000295549 BECN2A8MW95 431 aa24.36■■□□□ 1.49
LINC01116-201ENST00000295549 PPEF2O14830 753 aa24.36■■□□□ 1.49
LINC01116-201ENST00000295549 PMM2O15305 246 aa24.36■■□□□ 1.49
LINC01116-201ENST00000295549 ZNF18P17022 549 aa24.36■■□□□ 1.49
LINC01116-201ENST00000295549 IGFBP6P24592 240 aaPredicted RBP24.36■■□□□ 1.49
LINC01116-201ENST00000295549 POLR2BP30876 1174 aaKnown RBP24.36■■□□□ 1.49
LINC01116-201ENST00000295549 PNPLA4P41247 253 aa24.36■■□□□ 1.49
LINC01116-201ENST00000295549 UBE3AQ05086 875 aa24.36■■□□□ 1.49
LINC01116-201ENST00000295549 TCP11X2Q5H9J9 407 aa24.36■■□□□ 1.49
LINC01116-201ENST00000295549 KRT39Q6A163 491 aa24.36■■□□□ 1.49
LINC01116-201ENST00000295549 DDX53Q86TM3 631 aaKnown RBP24.36■■□□□ 1.49
LINC01116-201ENST00000295549 CREBRFQ8IUR6 639 aa24.36■■□□□ 1.49
LINC01116-201ENST00000295549 LRRC52Q8N7C0 313 aa24.36■■□□□ 1.49
LINC01116-201ENST00000295549 FAM200AQ8TCP9 573 aa24.36■■□□□ 1.49
LINC01116-201ENST00000295549 ANP32EQ9BTT0 268 aa24.36■■□□□ 1.49
LINC01116-201ENST00000295549 CDH23Q9H251 3354 aa24.36■■□□□ 1.49
LINC01116-201ENST00000295549 KCNJ18B7U540 433 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 KRT19P08727 400 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 AARSP49588 968 aaKnown RBP eCLIP24.35■■□□□ 1.49
LINC01116-201ENST00000295549 LILRA4P59901 499 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 BIRC3Q13489 604 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 KCNJ12Q14500 433 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 HSP90AA4PQ58FG1 418 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 SPPL3Q8TCT6 385 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 ZNF560Q96MR9 790 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 PUF60Q9UHX1 559 aaKnown RBP24.35■■□□□ 1.49
LINC01116-201ENST00000295549 R3HCC1Q9Y3T6 440 aaKnown RBP24.35■■□□□ 1.49
LINC01116-201ENST00000295549 NUB1Q9Y5A7 615 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 SF3B1O75533 1304 aaKnown RBP eCLIP24.35■■□□□ 1.49
LINC01116-201ENST00000295549 TRAPPC3O43617 180 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 PHACTR2O75167 634 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 CST3P01034 146 aaPredicted RBP24.35■■□□□ 1.49
LINC01116-201ENST00000295549 MTIF2P46199 727 aaKnown RBP24.35■■□□□ 1.49
LINC01116-201ENST00000295549 TAF6P49848 677 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 MXI1P50539 228 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 KCNH2Q12809 1159 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 ELAVL2Q12926 359 aaKnown RBP24.35■■□□□ 1.49
LINC01116-201ENST00000295549 GPM6BQ13491 265 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 TRPC3Q13507 836 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 ZNF697Q5TEC3 545 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 SCARA3Q6AZY7 606 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 FUT10Q6P4F1 479 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 RNF168Q8IYW5 571 aaPredicted RBP24.35■■□□□ 1.49
LINC01116-201ENST00000295549 HASPINQ8TF76 798 aa24.35■■□□□ 1.49
LINC01116-201ENST00000295549 ALG13Q9NP73 1137 aaKnown RBP24.35■■□□□ 1.49
LINC01116-201ENST00000295549 EPOPA6NHQ4 379 aa24.34■■□□□ 1.49
LINC01116-201ENST00000295549 VNN1O95497 513 aa24.34■■□□□ 1.49
LINC01116-201ENST00000295549 ATICP31939 592 aa24.34■■□□□ 1.49
LINC01116-201ENST00000295549 FMO5P49326 533 aa24.34■■□□□ 1.49
LINC01116-201ENST00000295549 MYO1EQ12965 1108 aa24.34■■□□□ 1.49
LINC01116-201ENST00000295549 NCOA4Q13772 614 aa24.34■■□□□ 1.49
LINC01116-201ENST00000295549 CBWD6Q4V339 395 aa24.34■■□□□ 1.49
LINC01116-201ENST00000295549 CBWD3Q5JTY5 395 aa24.34■■□□□ 1.49
LINC01116-201ENST00000295549 CBWD5Q5RIA9 395 aa24.34■■□□□ 1.49
LINC01116-201ENST00000295549 TUBGCP2Q9BSJ2 902 aa24.34■■□□□ 1.49
LINC01116-201ENST00000295549 VN1R3Q9BXE9 311 aa24.34■■□□□ 1.49
LINC01116-201ENST00000295549 GPR62Q9BZJ7 368 aa24.34■■□□□ 1.49
LINC01116-201ENST00000295549 MMRN2Q9H8L6 949 aa24.34■■□□□ 1.49
LINC01116-201ENST00000295549 COQ4Q9Y3A0 265 aa24.34■■□□□ 1.49
LINC01116-201ENST00000295549 KIAA1671Q9BY89 1806 aa24.33■■□□□ 1.49
LINC01116-201ENST00000295549 SPTLC1O15269 473 aa24.33■■□□□ 1.49
LINC01116-201ENST00000295549 P4HA2O15460 535 aa24.33■■□□□ 1.49
LINC01116-201ENST00000295549 N4BP1O75113 896 aaKnown RBP24.33■■□□□ 1.49
LINC01116-201ENST00000295549 STAU1O95793 577 aaKnown RBP24.33■■□□□ 1.49
LINC01116-201ENST00000295549 AFPP02771 609 aaKnown RBP24.33■■□□□ 1.49
LINC01116-201ENST00000295549 MAN2A1Q16706 1144 aa24.33■■□□□ 1.49
LINC01116-201ENST00000295549 SV2CQ496J9 727 aa24.33■■□□□ 1.49
LINC01116-201ENST00000295549 LUZP1Q86V48 1076 aa24.33■■□□□ 1.49
LINC01116-201ENST00000295549 HPDLQ96IR7 371 aa24.33■■□□□ 1.49
LINC01116-201ENST00000295549 SUSD3Q96L08 255 aa24.33■■□□□ 1.49
LINC01116-201ENST00000295549 XYLT2Q9H1B5 865 aa24.33■■□□□ 1.49
LINC01116-201ENST00000295549 LRRC10BA6NIK2 292 aa24.32■■□□□ 1.48
LINC01116-201ENST00000295549 M0QZQ0 153 aa24.32■■□□□ 1.48
LINC01116-201ENST00000295549 GRM6O15303 877 aa24.32■■□□□ 1.48
LINC01116-201ENST00000295549 SOD2P04179 222 aa24.32■■□□□ 1.48
LINC01116-201ENST00000295549 BRCC3P46736 316 aa24.32■■□□□ 1.48
LINC01116-201ENST00000295549 TIGD5Q53EQ6 642 aa24.32■■□□□ 1.48
LINC01116-201ENST00000295549 FBXL13Q8NEE6 735 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms