RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 PRO3102Q9H379 93 aa17.13■□□□□ 0.33
MRPL55-201ENST00000295008 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.13■□□□□ 0.331e-6■■■■■ 103.7
MRPL55-201ENST00000295008 COQ4Q9Y3A0 265 aa17.13■□□□□ 0.33
MRPL55-201ENST00000295008 GTPBP10A4D1E9 387 aaKnown RBP17.12■□□□□ 0.33
MRPL55-201ENST00000295008 LCHNA4D1U4 455 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 PIRO00625 290 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 CBFA2T2O43439 604 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 LRRN2O75325 713 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 RPL9P32969 192 aaKnown RBP17.12■□□□□ 0.33
MRPL55-201ENST00000295008 PBX3P40426 434 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 SLC11A1P49279 550 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 CETN1Q12798 172 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 GSE1Q14687 1217 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 NR1I3Q14994 352 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 PTPN21Q16825 1174 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 UPP1Q16831 310 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 SPOUT1Q5T280 376 aaKnown RBP17.12■□□□□ 0.33
MRPL55-201ENST00000295008 GBP6Q6ZN66 633 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 FIBCD1Q8N539 461 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 LRRC52Q8N7C0 313 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 C3orf58Q8NDZ4 430 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 ELMO3Q96BJ8 720 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 DDX27Q96GQ7 796 aaKnown RBP17.12■□□□□ 0.33
MRPL55-201ENST00000295008 ZNF560Q96MR9 790 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 TMEM175Q9BSA9 504 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 PI4K2AQ9BTU6 479 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 INTS2Q9H0H0 1204 aaKnown RBP17.12■□□□□ 0.33
MRPL55-201ENST00000295008 GRPEL1Q9HAV7 217 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 RAB20Q9NX57 234 aa17.12■□□□□ 0.33
MRPL55-201ENST00000295008 PRG3Q9Y2Y8 225 aaPredicted RBP17.12■□□□□ 0.33
MRPL55-201ENST00000295008 R3HCC1Q9Y3T6 440 aaKnown RBP17.12■□□□□ 0.33
MRPL55-201ENST00000295008 F8W810 466 aa17.11■□□□□ 0.33
MRPL55-201ENST00000295008 NRP1O14786 923 aa17.11■□□□□ 0.33
MRPL55-201ENST00000295008 CLSTN1O94985 981 aa17.11■□□□□ 0.33
MRPL55-201ENST00000295008 KIF4AO95239 1232 aa17.11■□□□□ 0.33
MRPL55-201ENST00000295008 GALTP07902 379 aa17.11■□□□□ 0.33
MRPL55-201ENST00000295008 MYOGP15173 224 aa17.11■□□□□ 0.33
MRPL55-201ENST00000295008 LAG3P18627 525 aa17.11■□□□□ 0.33
MRPL55-201ENST00000295008 IGFBP6P24592 240 aaPredicted RBP17.11■□□□□ 0.33
MRPL55-201ENST00000295008 BCAR1P56945 870 aa17.11■□□□□ 0.33
MRPL55-201ENST00000295008 KCNMA1Q12791 1236 aa17.11■□□□□ 0.33
MRPL55-201ENST00000295008 SYCP1Q15431 976 aa17.11■□□□□ 0.33
MRPL55-201ENST00000295008 EXOC3L4Q17RC7 722 aa17.11■□□□□ 0.33
MRPL55-201ENST00000295008 ZNF699Q32M78 642 aa17.11■□□□□ 0.33
MRPL55-201ENST00000295008 LMO3Q8TAP4 145 aa17.11■□□□□ 0.33
MRPL55-201ENST00000295008 HPDLQ96IR7 371 aa17.11■□□□□ 0.33
MRPL55-201ENST00000295008 TRIM5Q9C035 493 aa17.11■□□□□ 0.33
MRPL55-201ENST00000295008 XYLT2Q9H1B5 865 aa17.11■□□□□ 0.33
MRPL55-201ENST00000295008 ASS1P00966 412 aaKnown RBP17.1■□□□□ 0.33
MRPL55-201ENST00000295008 ITGB1P05556 798 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 LINC00271P0C7V0 271 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 SLC9A1P19634 815 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 PON1P27169 355 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 ATICP31939 592 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 PNPLA4P41247 253 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 TAF6P49848 677 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 KLK7P49862 253 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 NOP14P78316 857 aaKnown RBP17.1■□□□□ 0.33
MRPL55-201ENST00000295008 SPOPLQ6IQ16 392 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 CD300LGQ6UXG3 332 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 COLGALT1Q8NBJ5 622 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 EHBP1Q8NDI1 1231 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 HASPINQ8TF76 798 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 ZNF558Q96NG5 402 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 ERGIC2Q96RQ1 377 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 LSM14BQ9BX40 385 aaKnown RBP17.1■□□□□ 0.33
MRPL55-201ENST00000295008 IMPG2Q9BZV3 1241 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 APOBEC3GQ9HC16 384 aaKnown RBP17.1■□□□□ 0.33
MRPL55-201ENST00000295008 MARCH5Q9NX47 278 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 SIK3Q9Y2K2 1263 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 YBX2Q9Y2T7 364 aaKnown RBP17.1■□□□□ 0.33
MRPL55-201ENST00000295008 PCDHA11Q9Y5I1 949 aa17.1■□□□□ 0.33
MRPL55-201ENST00000295008 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.09■□□□□ 0.33
MRPL55-201ENST00000295008 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.09■□□□□ 0.33
MRPL55-201ENST00000295008 LINC01553A4QN01 128 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 NT5C1B-RDH14C9J2C7 533 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 TMEM189-UBE2V1I3L0A0 370 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 SPTLC1O15269 473 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 B3GAT3O94766 335 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 ARHGEF15O94989 841 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 STAU1O95793 577 aaKnown RBP17.09■□□□□ 0.33
MRPL55-201ENST00000295008 TPM3P06753 285 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 PBX2P40425 430 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 ZNF75DP51815 510 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 APBA1Q02410 837 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 LRMPQ12912 555 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 MYO1EQ12965 1108 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 SGSM1Q2NKQ1 1148 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 SV2CQ496J9 727 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 WDR44Q5JSH3 913 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 TRIM65Q6PJ69 517 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 DCLRE1AQ6PJP8 1040 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 KCNT2Q6UVM3 1135 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 TMEM173Q86WV6 379 aaPredicted RBP17.09■□□□□ 0.33
MRPL55-201ENST00000295008 CCDC150Q8NCX0 1101 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 BCL7CQ8WUZ0 217 aaPredicted RBP17.09■□□□□ 0.33
MRPL55-201ENST00000295008 TAF4BQ92750 862 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 VRTNQ9H8Y1 702 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 SIX2Q9NPC8 291 aa17.09■□□□□ 0.33
MRPL55-201ENST00000295008 FAN1Q9Y2M0 1017 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms