RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 HES6Q96HZ4 224 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 INO80BQ9C086 356 aaPredicted RBP9.8□□□□□ -0.84
PDPN-201ENST00000294489 STIM2Q9P246 746 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 PGRMC1O00264 195 aaKnown RBP9.8□□□□□ -0.84
PDPN-201ENST00000294489 ZMYND10O75800 440 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 ARF4P18085 180 aaPredicted RBP9.8□□□□□ -0.84
PDPN-201ENST00000294489 RNASE9P60153 205 aaKnown RBP9.8□□□□□ -0.84
PDPN-201ENST00000294489 PTPROQ16827 1216 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 TMEM132AQ24JP5 1023 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 ZNF568Q3ZCX4 644 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 MFSD14CQ5VZR4 134 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 RUFY4Q6ZNE9 571 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 ZBTB33Q86T24 672 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 ZNF677Q86XU0 584 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 PCDHB18PQ96TA0 734 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 APOBEC3GQ9HC16 384 aaKnown RBP9.8□□□□□ -0.84
PDPN-201ENST00000294489 ACP6Q9NPH0 428 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 PCDHB2Q9Y5E7 798 aa9.8□□□□□ -0.84
PDPN-201ENST00000294489 AOC2O75106 756 aa9.79□□□□□ -0.84
PDPN-201ENST00000294489 ASS1P00966 412 aaKnown RBP9.79□□□□□ -0.84
PDPN-201ENST00000294489 CLTAP09496 248 aa9.79□□□□□ -0.84
PDPN-201ENST00000294489 TBXAS1P24557 533 aaPredicted RBP9.79□□□□□ -0.84
PDPN-201ENST00000294489 IRX5P78411 483 aaPredicted RBP9.79□□□□□ -0.84
PDPN-201ENST00000294489 SMC1AQ14683 1233 aaKnown RBP9.79□□□□□ -0.84
PDPN-201ENST00000294489 CASP8Q14790 479 aa9.79□□□□□ -0.84
PDPN-201ENST00000294489 NME8Q8N427 588 aa9.79□□□□□ -0.84
PDPN-201ENST00000294489 CAPNS2Q96L46 248 aa9.79□□□□□ -0.84
PDPN-201ENST00000294489 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.79□□□□□ -0.84
PDPN-201ENST00000294489 HOXA11P31270 313 aaPredicted RBP9.79□□□□□ -0.84
PDPN-201ENST00000294489 TNNT3P45378 269 aaPredicted RBP9.79□□□□□ -0.84
PDPN-201ENST00000294489 FLT3LGP49771 235 aa9.79□□□□□ -0.84
PDPN-201ENST00000294489 CUL2Q13617 745 aa9.79□□□□□ -0.84
PDPN-201ENST00000294489 DEFB115Q30KQ5 88 aa9.79□□□□□ -0.84
PDPN-201ENST00000294489 SEZ6Q53EL9 994 aa9.79□□□□□ -0.84
PDPN-201ENST00000294489 C11orf63Q6NUN7 778 aa9.79□□□□□ -0.84
PDPN-201ENST00000294489 SESTD1Q86VW0 696 aa9.79□□□□□ -0.84
PDPN-201ENST00000294489 EFCAB13Q8IY85 973 aa9.79□□□□□ -0.84
PDPN-201ENST00000294489 DMGDHQ9UI17 866 aaKnown RBP9.79□□□□□ -0.84
PDPN-201ENST00000294489 MYADML2A6NDP7 307 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 SEPT4O43236 478 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 CST5P28325 142 aaPredicted RBP9.78□□□□□ -0.84
PDPN-201ENST00000294489 ZNF132P52740 706 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 NCOA4Q13772 614 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 CLUL1Q15846 466 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 DUOXA2Q1HG44 320 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 MAP3K21Q5TCX8 1036 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 CCSAPQ6IQ19 270 aaPredicted RBP9.78□□□□□ -0.84
PDPN-201ENST00000294489 IFT20Q8IY31 132 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 KLHDC9Q8NEP7 349 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 ELMO3Q96BJ8 720 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 FAM84AQ96KN4 292 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 KRT12Q99456 494 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 ASB7Q9H672 318 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 GTF3C4Q9UKN8 822 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 COG5Q9UP83 839 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 FAM170AA1A519 330 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 MIF4GDA9UHW6 222 aaKnown RBP9.78□□□□□ -0.84
PDPN-201ENST00000294489 CCDC188H7C350 402 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 ADAMTS4O75173 837 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 DARSP14868 501 aaKnown RBP9.78□□□□□ -0.84
PDPN-201ENST00000294489 NOP14P78316 857 aaKnown RBP9.78□□□□□ -0.84
PDPN-201ENST00000294489 BEX3Q00994 111 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 SLC7A5Q01650 507 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 PRKCZQ05513 592 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 DCAF4L1Q3SXM0 396 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 ACAD10Q6JQN1 1059 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 RPAINQ86UA6 219 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 NT5DC4Q86YG4 428 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 RASGEF1CQ8N431 466 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 HDAC7Q8WUI4 952 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 NLRP7Q8WX94 980 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 ZNF653Q96CK0 615 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 FAM212AQ96EL1 285 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 NAP1L3Q99457 506 aaPredicted RBP9.78□□□□□ -0.84
PDPN-201ENST00000294489 XYLT2Q9H1B5 865 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 VRTNQ9H8Y1 702 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 UVRAGQ9P2Y5 699 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 TMEM59LQ9UK28 342 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 NOC2LQ9Y3T9 749 aaKnown RBP9.78□□□□□ -0.84
PDPN-201ENST00000294489 ALG6Q9Y672 507 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 MTA2O94776 668 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 MYL3P08590 195 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 STAG3L1P0CL83 205 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 CYP2C9P11712 490 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 AXLP30530 894 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 GRM5P41594 1212 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 SP3Q02447 781 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 CACNB2Q08289 660 aaPredicted RBP9.78□□□□□ -0.84
PDPN-201ENST00000294489 CLEC16AQ2KHT3 1053 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 SCARA3Q6AZY7 606 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 SPOPLQ6IQ16 392 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 TMEM192Q8IY95 271 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 UBL4BQ8N7F7 174 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 ZNF668Q96K58 619 aaPredicted RBP9.78□□□□□ -0.84
PDPN-201ENST00000294489 MTG1Q9BT17 334 aaPredicted RBP9.78□□□□□ -0.84
PDPN-201ENST00000294489 GCOM2Q9BZD3 368 aaPredicted RBP9.78□□□□□ -0.84
PDPN-201ENST00000294489 CARD9Q9H257 536 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 VIPAS39Q9H9C1 493 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 NUB1Q9Y5A7 615 aa9.78□□□□□ -0.84
PDPN-201ENST00000294489 PCDHB4Q9Y5E5 795 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms