RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 PLVAPQ9BX97 442 aa16.83■□□□□ 0.29
NCKIPSD-201ENST00000294129 SLC12A6Q9UHW9 1150 aa16.83■□□□□ 0.29
NCKIPSD-201ENST00000294129 CD2APQ9Y5K6 639 aa16.83■□□□□ 0.29
NCKIPSD-201ENST00000294129 RGS16O15492 202 aaPredicted RBP16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 ZC3H11AO75152 810 aaKnown RBP eCLIP16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 STAM2O75886 525 aa16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 ACO1P21399 889 aaKnown RBP16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 IRX3P78415 501 aaPredicted RBP16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 ATP13A4Q4VNC1 1196 aa16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 HOOK3Q86VS8 718 aa16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 THNSL1Q8IYQ7 743 aa16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 RNF149Q8NC42 400 aa16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 IMPG2Q9BZV3 1241 aa16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 A0A0B4J269 797 aa16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 A6NNZ2 444 aa16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 CLTAP09496 248 aa16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 TFAMQ00059 246 aaKnown RBP16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 TUBB8Q3ZCM7 444 aa16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 SLFN12LQ6IEE8 588 aa16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 CHST13Q8NET6 341 aa16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 NLRP4Q96MN2 994 aa16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 NRBP2Q9NSY0 501 aa16.83■□□□□ 0.28
NCKIPSD-201ENST00000294129 LCTP09848 1927 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 NOP56O00567 594 aaKnown RBP16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 IRF6O14896 467 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 TLR3O15455 904 aaKnown RBP16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 CSDE1O75534 798 aaKnown RBP16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 DDNO94850 711 aaPredicted RBP16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 KIAA0754O94854 1291 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 WEE2P0C1S8 567 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 BRD2P25440 801 aaKnown RBP16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 BPIFB4P59827 614 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 IFT88Q13099 833 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 QPCTQ16769 361 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 HSDL1Q3SXM5 330 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 TMEM63BQ5T3F8 832 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 LIN9Q5TKA1 542 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 AGBL2Q5U5Z8 902 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 PPM1EQ8WY54 764 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 RAPGEF5Q92565 580 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 SPATC1LQ9H0A9 340 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 EFCC1Q9HA90 598 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 CSADQ9Y600 493 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 FOXO6A8MYZ6 492 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 ARIH2O95376 493 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 TCF4P15884 667 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 CHKAP35790 457 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 MYL6P60660 151 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 RPL7AP62424 266 aaKnown RBP16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 NOMO3P69849 1222 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 TTLL12Q14166 644 aaPredicted RBP16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 LBX2Q6XYB7 198 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 MON1BQ7L1V2 547 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 RHPN2Q8IUC4 686 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 DNERQ8NFT8 737 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 CLMNQ96JQ2 1002 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 CGRRF1Q99675 332 aa16.82■□□□□ 0.28
NCKIPSD-201ENST00000294129 ADCY8P40145 1251 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 EIF3BP55884 814 aaKnown RBP16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 CENPCQ03188 943 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 LONRF1Q17RB8 773 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 ABRAQ8N0Z2 381 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 CNTNAP2Q9UHC6 1331 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 GMNCA6NCL1 334 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 ADCY3O60266 1144 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 ATP2C2O75185 946 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 POTEJP0CG39 1038 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 KRT10P13645 584 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 ATF7P17544 494 aaPredicted RBP16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 DRG2P55039 364 aaKnown RBP16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 ORC1Q13415 861 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 MAMLD1Q13495 774 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 CYP1B1Q16678 543 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 B4GALNT4Q76KP1 1039 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 CEP120Q8N960 986 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 C1orf131Q8NDD1 294 aaKnown RBP16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 COPS5Q92905 334 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 HAUS1Q96CS2 278 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 PARP2Q9UGN5 583 aa16.81■□□□□ 0.28
NCKIPSD-201ENST00000294129 FSCN2O14926 492 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 RIPK2O43353 540 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 ATG7O95352 703 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 FAM107AO95990 144 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 CYP1A1P04798 512 aaPredicted RBP16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 IFNAR2P48551 515 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 FNTAP49354 379 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 IGBP1P78318 339 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 ANKS1BQ7Z6G8 1248 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 OTUD6BQ8N6M0 293 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 DDX27Q96GQ7 796 aaKnown RBP16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 NXF1Q9UBU9 619 aaKnown RBP16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 PROSCO94903 275 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 LDHAP00338 332 aaKnown RBP16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 ICAM3P32942 547 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 CLDN10P78369 228 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 FAM160B1Q5W0V3 765 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 GSTA5Q7RTV2 222 aa16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 FBXO16Q8IX29 292 aaPredicted RBP16.8■□□□□ 0.28
NCKIPSD-201ENST00000294129 MGARPQ8TDB4 240 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms