RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 SUGT1Q9Y2Z0 365 aa15.6■□□□□ 0.09
CCNF-201ENST00000293968 RGL2O15211 777 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 KRT1P04264 644 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 MIS18BP1Q6P0N0 1132 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 LVRNQ6Q4G3 990 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 SCYL3Q8IZE3 742 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 C12orf50Q8NA57 414 aaPredicted RBP15.59■□□□□ 0.09
CCNF-201ENST00000293968 MCUR1Q96AQ8 359 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 FHDC1Q9C0D6 1143 aaPredicted RBP15.59■□□□□ 0.09
CCNF-201ENST00000293968 EIF2AK2P19525 551 aaKnown RBP15.59■□□□□ 0.09
CCNF-201ENST00000293968 CNGA1P29973 690 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 MTDHQ86UE4 582 aaKnown RBP15.59■□□□□ 0.09
CCNF-201ENST00000293968 VPS52Q8N1B4 723 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 AGGF1Q8N302 714 aaeCLIP15.59■□□□□ 0.09
CCNF-201ENST00000293968 FAM13CQ8NE31 585 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 DTX3LQ8TDB6 740 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 ZFATQ9P243 1243 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 CCPG1Q9ULG6 757 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 TLR3O15455 904 aaKnown RBP15.59■□□□□ 0.09
CCNF-201ENST00000293968 CTCFP49711 727 aaPredicted RBP15.59■□□□□ 0.09
CCNF-201ENST00000293968 TAS2R40P59535 323 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 DMP1Q13316 513 aaPredicted RBP15.59■□□□□ 0.09
CCNF-201ENST00000293968 SPOPLQ6IQ16 392 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 SV2AQ7L0J3 742 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 MCOLN2Q8IZK6 566 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 SUPT20HQ8NEM7 779 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 RNPEPL1Q9HAU8 725 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 KMT5AQ9NQR1 393 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 PRKAG3Q9UGI9 489 aa15.59■□□□□ 0.09
CCNF-201ENST00000293968 CTDP1Q9Y5B0 961 aaPredicted RBP15.59■□□□□ 0.09
CCNF-201ENST00000293968 CCDC189A1A4V9 331 aa15.58■□□□□ 0.09
CCNF-201ENST00000293968 LRRD1A4D1F6 860 aa15.58■□□□□ 0.09
CCNF-201ENST00000293968 QARSP47897 775 aaKnown RBP15.58■□□□□ 0.09
CCNF-201ENST00000293968 SATB1Q01826 763 aa15.58■□□□□ 0.09
CCNF-201ENST00000293968 SYDE1Q6ZW31 735 aaPredicted RBP15.58■□□□□ 0.09
CCNF-201ENST00000293968 RHOT1Q8IXI2 618 aa15.58■□□□□ 0.09
CCNF-201ENST00000293968 GMCL1P1Q8NEA9 526 aa15.58■□□□□ 0.09
CCNF-201ENST00000293968 SPIRE2Q8WWL2 714 aa15.58■□□□□ 0.09
CCNF-201ENST00000293968 KIAA1586Q9HCI6 787 aa15.58■□□□□ 0.09
CCNF-201ENST00000293968 METTL5Q9NRN9 209 aaKnown RBP15.58■□□□□ 0.09
CCNF-201ENST00000293968 PCDHB4Q9Y5E5 795 aa15.58■□□□□ 0.09
CCNF-201ENST00000293968 A0A1W2PPM1 405 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 ALADP13716 330 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 IVDP26440 423 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 RARRES1P49788 294 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 TRAF1Q13077 416 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 SYCP2LQ5T4T6 812 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 RHBDF2Q6PJF5 856 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 ASRGL1Q7L266 308 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 USP37Q86T82 979 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 LDHDQ86WU2 507 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 GLIS1Q8NBF1 620 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 SPDYE1Q8NFV5 336 aaPredicted RBP15.58■□□□□ 0.08
CCNF-201ENST00000293968 UTP4Q969X6 686 aaKnown RBP15.58■□□□□ 0.08
CCNF-201ENST00000293968 AGBL1Q96MI9 1066 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 C10orf88Q9H8K7 445 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 TP73O15350 636 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 TROVE2P10155 538 aaKnown RBP eCLIP15.58■□□□□ 0.08
CCNF-201ENST00000293968 KRT4P19013 534 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 CALB2P22676 271 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 TMEM270Q6UE05 265 aa15.58■□□□□ 0.08
CCNF-201ENST00000293968 TESPA1A2RU30 521 aaPredicted RBP15.57■□□□□ 0.08
CCNF-201ENST00000293968 SMNDC1O75940 238 aaKnown RBP eCLIP15.57■□□□□ 0.081e-6■■□□□ 13.6
CCNF-201ENST00000293968 MTA2O94776 668 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 PECAM1P16284 738 aaPredicted RBP15.57■□□□□ 0.08
CCNF-201ENST00000293968 PIK3CAP42336 1068 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 IRX1P78414 480 aaPredicted RBP15.57■□□□□ 0.08
CCNF-201ENST00000293968 THEMIS2Q5TEJ8 643 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 NLRP9Q7RTR0 991 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 CCDC125Q86Z20 511 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 ADGRA3Q8IWK6 1321 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 HELQQ8TDG4 1101 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 PARD3BQ8TEW8 1205 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 CHURC1Q8WUH1 139 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 TMEM8AQ9HCN3 771 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 MROH7Q68CQ1 1323 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 SLC1A5Q15758 541 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 DCUN1D2Q6PH85 259 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 STK32AQ8WU08 396 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 MXRA8Q9BRK3 442 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 DNPEPQ9ULA0 475 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 EME2A4GXA9 379 aaPredicted RBP15.57■□□□□ 0.08
CCNF-201ENST00000293968 ATP5HO75947 161 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 ITGB5P18084 799 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 PSMC4P43686 418 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 CERKQ8TCT0 537 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 IWS1Q96ST2 819 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 TMOD2Q9NZR1 351 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 XIRP1Q702N8 1843 aaKnown RBP15.57■□□□□ 0.08
CCNF-201ENST00000293968 ABL2P42684 1182 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 ALCAMQ13740 583 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 BRDTQ58F21 947 aaPredicted RBP15.57■□□□□ 0.08
CCNF-201ENST00000293968 IL31RAQ8NI17 732 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 ZDHHC15Q96MV8 337 aa15.57■□□□□ 0.08
CCNF-201ENST00000293968 TMEM154Q6P9G4 183 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 TRABD2AQ86V40 505 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 ANKLE1Q8NAG6 615 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 DNAJC9Q8WXX5 260 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 STMN2Q93045 179 aa15.56■□□□□ 0.08
CCNF-201ENST00000293968 CNKSR1Q969H4 720 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms