RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 SKIDA1Q1XH10 827 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 CELF3Q5SZQ8 465 aaKnown RBP21.31■■□□□ 1
CXCL16-201ENST00000293778 ZBTB8OSQ8IWT0 167 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 ANKRD13AQ8IZ07 590 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 RABEP2Q9H5N1 569 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 TXNRD2Q9NNW7 524 aa21.31■■□□□ 1
CXCL16-201ENST00000293778 BCCIPQ9P287 314 aaKnown RBP eCLIP21.31■■□□□ 1
CXCL16-201ENST00000293778 RRP15Q9Y3B9 282 aaKnown RBP21.31■■□□□ 1
CXCL16-201ENST00000293778 GAS2O43903 313 aaKnown RBP21.3■■□□□ 1
CXCL16-201ENST00000293778 ZEB2O60315 1214 aa21.3■■□□□ 1
CXCL16-201ENST00000293778 PROSCO94903 275 aa21.3■■□□□ 1
CXCL16-201ENST00000293778 PRKCBP05771 671 aa21.3■■□□□ 1
CXCL16-201ENST00000293778 SSTR3P32745 418 aaPredicted RBP21.3■■□□□ 1
CXCL16-201ENST00000293778 KCNJ1P48048 391 aa21.3■■□□□ 1
CXCL16-201ENST00000293778 GRM1Q13255 1194 aa21.3■■□□□ 1
CXCL16-201ENST00000293778 LLGL1Q15334 1064 aa21.3■■□□□ 1
CXCL16-201ENST00000293778 KRT71Q3SY84 523 aa21.3■■□□□ 1
CXCL16-201ENST00000293778 SRLQ86TD4 932 aa21.3■■□□□ 1
CXCL16-201ENST00000293778 LRRC71Q8N4P6 559 aa21.3■■□□□ 1
CXCL16-201ENST00000293778 RNF149Q8NC42 400 aa21.3■■□□□ 1
CXCL16-201ENST00000293778 VCPIP1Q96JH7 1222 aa21.3■■□□□ 1
CXCL16-201ENST00000293778 ACO2Q99798 780 aaKnown RBP21.3■■□□□ 1
CXCL16-201ENST00000293778 MTRF1LQ9UGC7 380 aaKnown RBP21.3■■□□□ 1
CXCL16-201ENST00000293778 SPDYE5A6NIY4 337 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 ECEL1O95672 775 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 MAPK6Q16659 721 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 SGO2Q562F6 1265 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 SCARA3Q6AZY7 606 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 PHF13Q86YI8 300 aaPredicted RBP21.29■■□□□ 1
CXCL16-201ENST00000293778 EXOC8Q8IYI6 725 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 PABPC3Q9H361 631 aaKnown RBP21.29■■□□□ 1
CXCL16-201ENST00000293778 MRPL47Q9HD33 250 aaKnown RBP21.29■■□□□ 1
CXCL16-201ENST00000293778 RBPJLQ9UBG7 517 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 UTRNP46939 3433 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 SBF1O95248 1867 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 ZBTB42B2RXF5 422 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 OGTO15294 1046 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 ASS1P00966 412 aaKnown RBP21.29■■□□□ 1
CXCL16-201ENST00000293778 LSP1P33241 339 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 MDH1P40925 334 aaKnown RBP21.29■■□□□ 1
CXCL16-201ENST00000293778 CCT5P48643 541 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 KCTD2Q14681 263 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 PPP1R2P3Q6NXS1 205 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 MOB2Q70IA6 237 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.29■■□□□ 1
CXCL16-201ENST00000293778 PLPPR4Q7Z2D5 763 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 MAIP1Q8WWC4 291 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 C1orf54Q8WWF1 131 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 FAM212AQ96EL1 285 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 EPB41L4BQ9H329 900 aa21.29■■□□□ 1
CXCL16-201ENST00000293778 IGKV6-21A0A0C4DH24 114 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 CST3P01034 146 aaPredicted RBP21.28■■□□□ 1
CXCL16-201ENST00000293778 MAMLD1Q13495 774 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 PLCB4Q15147 1175 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 MMS22LQ6ZRQ5 1243 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 UBR7Q8N806 425 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 DDX27Q96GQ7 796 aaKnown RBP21.28■■□□□ 1
CXCL16-201ENST00000293778 MMP19Q99542 508 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 MTMR12Q9C0I1 747 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 LCMT1Q9UIC8 334 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 KCNH4Q9UQ05 1017 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 NUDT17P0C025 328 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 ZNF132P52740 706 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 C1QBPQ07021 282 aaKnown RBP21.28■■□□□ 1
CXCL16-201ENST00000293778 TTLL12Q14166 644 aaPredicted RBP21.28■■□□□ 1
CXCL16-201ENST00000293778 PPP1R7Q15435 360 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 Q3C1V9 767 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 PLEKHA7Q6IQ23 1121 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 DHX37Q8IY37 1157 aaKnown RBP21.28■■□□□ 1
CXCL16-201ENST00000293778 SLCO2A1Q92959 643 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 SPATA33Q96N06 139 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 C2orf40Q9H1Z8 148 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 SCINQ9Y6U3 715 aa21.28■■□□□ 1
CXCL16-201ENST00000293778 DNAJC25-GNG10A0A024R161 153 aa21.27■■□□□ 1
CXCL16-201ENST00000293778 NF2P35240 595 aa21.27■■□□□ 1
CXCL16-201ENST00000293778 MCL1Q07820 350 aa21.27■■□□□ 1
CXCL16-201ENST00000293778 PTP4A2Q12974 167 aa21.27■■□□□ 1
CXCL16-201ENST00000293778 DENND2CQ68D51 928 aa21.27■■□□□ 1
CXCL16-201ENST00000293778 FBXO16Q8IX29 292 aaPredicted RBP21.27■■□□□ 1
CXCL16-201ENST00000293778 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.27■■□□□ 1
CXCL16-201ENST00000293778 ART4Q93070 314 aa21.27■■□□□ 1
CXCL16-201ENST00000293778 RNF181Q9P0P0 153 aa21.27■■□□□ 1
CXCL16-201ENST00000293778 NOVA2Q9UNW9 492 aaKnown RBP21.27■■□□□ 1
CXCL16-201ENST00000293778 TULP2O00295 520 aa21.27■□□□□ 0.99
CXCL16-201ENST00000293778 ABLIM1O14639 778 aa21.27■□□□□ 0.99
CXCL16-201ENST00000293778 MYL6P60660 151 aa21.27■□□□□ 0.99
CXCL16-201ENST00000293778 PPIL2Q13356 520 aa21.27■□□□□ 0.99
CXCL16-201ENST00000293778 SURF1Q15526 300 aa21.27■□□□□ 0.99
CXCL16-201ENST00000293778 DUOXA2Q1HG44 320 aa21.27■□□□□ 0.99
CXCL16-201ENST00000293778 ODF2Q5BJF6 829 aa21.27■□□□□ 0.99
CXCL16-201ENST00000293778 RHPN2Q8IUC4 686 aa21.27■□□□□ 0.99
CXCL16-201ENST00000293778 ZNF606Q8WXB4 792 aa21.27■□□□□ 0.99
CXCL16-201ENST00000293778 CDCA5Q96FF9 252 aa21.27■□□□□ 0.99
CXCL16-201ENST00000293778 CPSF3Q9UKF6 684 aaKnown RBP21.27■□□□□ 0.99
CXCL16-201ENST00000293778 PSTPIP1O43586 416 aa21.26■□□□□ 0.99
CXCL16-201ENST00000293778 SNX1Q13596 522 aa21.26■□□□□ 0.99
CXCL16-201ENST00000293778 WDR78Q5VTH9 848 aa21.26■□□□□ 0.99
CXCL16-201ENST00000293778 DAB2IPQ5VWQ8 1189 aa21.26■□□□□ 0.99
CXCL16-201ENST00000293778 HOOK3Q86VS8 718 aa21.26■□□□□ 0.99
CXCL16-201ENST00000293778 RHOT1Q8IXI2 618 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms