RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 PPM1EQ8WY54 764 aa29.08■■■□□ 2.25
SSU72-201ENST00000291386 ANKRD36BP1Q96IX9 119 aa29.08■■■□□ 2.25
SSU72-201ENST00000291386 SUSD3Q96L08 255 aa29.08■■■□□ 2.25
SSU72-201ENST00000291386 FNBP1Q96RU3 617 aa29.08■■■□□ 2.25
SSU72-201ENST00000291386 TTPALQ9BTX7 342 aa29.08■■■□□ 2.25
SSU72-201ENST00000291386 MKNK1Q9BUB5 465 aa29.08■■■□□ 2.25
SSU72-201ENST00000291386 TLE6Q9H808 572 aa29.08■■■□□ 2.25
SSU72-201ENST00000291386 RXFP1Q9HBX9 757 aa29.08■■■□□ 2.25
SSU72-201ENST00000291386 ITGA11Q9UKX5 1188 aa29.08■■■□□ 2.25
SSU72-201ENST00000291386 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP29.07■■■□□ 2.24
SSU72-201ENST00000291386 AKAP3O75969 853 aa29.07■■■□□ 2.24
SSU72-201ENST00000291386 TMEM191BP0C7N4 346 aa29.07■■■□□ 2.24
SSU72-201ENST00000291386 SCN1AP35498 2009 aa29.07■■■□□ 2.24
SSU72-201ENST00000291386 FKBP3Q00688 224 aaKnown RBP29.07■■■□□ 2.24
SSU72-201ENST00000291386 PTPRJQ12913 1337 aa29.07■■■□□ 2.24
SSU72-201ENST00000291386 CEP135Q66GS9 1140 aa29.07■■■□□ 2.24
SSU72-201ENST00000291386 KIAA1841Q6NSI8 718 aa29.07■■■□□ 2.24
SSU72-201ENST00000291386 PDXDC1Q6P996 788 aa29.07■■■□□ 2.24
SSU72-201ENST00000291386 TMC2Q8TDI7 906 aa29.07■■■□□ 2.24
SSU72-201ENST00000291386 PARD3BQ8TEW8 1205 aa29.07■■■□□ 2.24
SSU72-201ENST00000291386 AUTS2Q8WXX7 1259 aa29.07■■■□□ 2.24
SSU72-201ENST00000291386 PIK3R5Q8WYR1 880 aa29.07■■■□□ 2.24
SSU72-201ENST00000291386 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP29.07■■■□□ 2.241e-10■■□□□ 13.4
SSU72-201ENST00000291386 M0QZQ0 153 aa29.06■■■□□ 2.24
SSU72-201ENST00000291386 PPEF2O14830 753 aa29.06■■■□□ 2.24
SSU72-201ENST00000291386 SYN3O14994 580 aa29.06■■■□□ 2.24
SSU72-201ENST00000291386 CETN3O15182 167 aa29.06■■■□□ 2.24
SSU72-201ENST00000291386 PSMC2P35998 433 aaKnown RBP29.06■■■□□ 2.24
SSU72-201ENST00000291386 NRIP1P48552 1158 aa29.06■■■□□ 2.24
SSU72-201ENST00000291386 CTC1Q2NKJ3 1217 aa29.06■■■□□ 2.24
SSU72-201ENST00000291386 RTP2Q5QGT7 225 aa29.06■■■□□ 2.24
SSU72-201ENST00000291386 EFHBQ8N7U6 833 aa29.06■■■□□ 2.24
SSU72-201ENST00000291386 OR5B17Q8NGF7 314 aa29.06■■■□□ 2.24
SSU72-201ENST00000291386 PLEKHO2Q8TD55 490 aa29.06■■■□□ 2.24
SSU72-201ENST00000291386 CCDC127Q96BQ5 260 aa29.06■■■□□ 2.24
SSU72-201ENST00000291386 MTMR12Q9C0I1 747 aa29.06■■■□□ 2.24
SSU72-201ENST00000291386 FNIP2Q9P278 1114 aa29.06■■■□□ 2.24
SSU72-201ENST00000291386 TNNC2P02585 160 aa29.05■■■□□ 2.24
SSU72-201ENST00000291386 DLATP10515 647 aaKnown RBP29.05■■■□□ 2.24
SSU72-201ENST00000291386 TNNI1P19237 187 aa29.05■■■□□ 2.24
SSU72-201ENST00000291386 AP3M2P53677 418 aa29.05■■■□□ 2.24
SSU72-201ENST00000291386 LILRA4P59901 499 aa29.05■■■□□ 2.24
SSU72-201ENST00000291386 CREMQ03060 361 aa29.05■■■□□ 2.24
SSU72-201ENST00000291386 LMBRD2Q68DH5 695 aaPredicted RBP29.05■■■□□ 2.24
SSU72-201ENST00000291386 LNX1Q8TBB1 728 aaPredicted RBP29.05■■■□□ 2.24
SSU72-201ENST00000291386 NELFBQ8WX92 580 aa29.05■■■□□ 2.24
SSU72-201ENST00000291386 PABPC5Q96DU9 382 aaKnown RBP29.05■■■□□ 2.24
SSU72-201ENST00000291386 B3GALT6Q96L58 329 aa29.05■■■□□ 2.24
SSU72-201ENST00000291386 KLHL5Q96PQ7 755 aa29.05■■■□□ 2.24
SSU72-201ENST00000291386 EMILIN2Q9BXX0 1053 aa29.05■■■□□ 2.24
SSU72-201ENST00000291386 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29.04■■■□□ 2.24
SSU72-201ENST00000291386 BICDL2A1A5D9 508 aa29.04■■■□□ 2.24
SSU72-201ENST00000291386 TRIM49BA6NDI0 452 aa29.04■■■□□ 2.24
SSU72-201ENST00000291386 CLASP2O75122 1294 aaKnown RBP29.04■■■□□ 2.24
SSU72-201ENST00000291386 ITGB3P05106 788 aa29.04■■■□□ 2.24
SSU72-201ENST00000291386 PNPLA4P41247 253 aa29.04■■■□□ 2.24
SSU72-201ENST00000291386 ADAM15Q13444 863 aa29.04■■■□□ 2.24
SSU72-201ENST00000291386 KCNC3Q14003 757 aa29.04■■■□□ 2.24
SSU72-201ENST00000291386 TTI2Q6NXR4 508 aa29.04■■■□□ 2.24
SSU72-201ENST00000291386 INTS8Q75QN2 995 aaKnown RBP29.04■■■□□ 2.24
SSU72-201ENST00000291386 USP37Q86T82 979 aa29.04■■■□□ 2.24
SSU72-201ENST00000291386 RBM23Q86U06 439 aaKnown RBP29.04■■■□□ 2.24
SSU72-201ENST00000291386 FAM186BQ8IYM0 893 aa29.04■■■□□ 2.24
SSU72-201ENST00000291386 LRRC52Q8N7C0 313 aa29.04■■■□□ 2.24
SSU72-201ENST00000291386 MLKLQ8NB16 471 aa29.04■■■□□ 2.24
SSU72-201ENST00000291386 RIN2Q8WYP3 895 aaPredicted RBP29.04■■■□□ 2.24
SSU72-201ENST00000291386 POP1Q99575 1024 aaKnown RBP29.04■■■□□ 2.24
SSU72-201ENST00000291386 PCDHB8Q9UN66 801 aa29.04■■■□□ 2.24
SSU72-201ENST00000291386 LRRIQ3A6PVS8 624 aaPredicted RBP29.03■■■□□ 2.24
SSU72-201ENST00000291386 I3L4J1 428 aa29.03■■■□□ 2.24
SSU72-201ENST00000291386 PER2O15055 1255 aa29.03■■■□□ 2.24
SSU72-201ENST00000291386 SLC16A3O15427 465 aaKnown RBP29.03■■■□□ 2.24
SSU72-201ENST00000291386 C1RP00736 705 aa29.03■■■□□ 2.24
SSU72-201ENST00000291386 CNPP09543 421 aaKnown RBP29.03■■■□□ 2.24
SSU72-201ENST00000291386 TKTP29401 623 aaKnown RBP29.03■■■□□ 2.24
SSU72-201ENST00000291386 CA8P35219 290 aa29.03■■■□□ 2.24
SSU72-201ENST00000291386 GTF2F1P35269 517 aaKnown RBP eCLIP29.03■■■□□ 2.243e-7■□□□□ 9.7
SSU72-201ENST00000291386 TAF6P49848 677 aa29.03■■■□□ 2.24
SSU72-201ENST00000291386 RBP5P82980 135 aa29.03■■■□□ 2.24
SSU72-201ENST00000291386 PAK1Q13153 545 aa29.03■■■□□ 2.24
SSU72-201ENST00000291386 KLHL10Q6JEL2 608 aa29.03■■■□□ 2.24
SSU72-201ENST00000291386 CEP57Q86XR8 500 aa29.03■■■□□ 2.24
SSU72-201ENST00000291386 CSGALNACT2Q8N6G5 542 aa29.03■■■□□ 2.24
SSU72-201ENST00000291386 ZNF516Q92618 1163 aa29.03■■■□□ 2.24
SSU72-201ENST00000291386 BORCS6Q96GS4 357 aa29.03■■■□□ 2.24
SSU72-201ENST00000291386 ZNF560Q96MR9 790 aa29.03■■■□□ 2.24
SSU72-201ENST00000291386 SIX4Q9UIU6 781 aa29.03■■■□□ 2.24
SSU72-201ENST00000291386 COG5Q9UP83 839 aa29.03■■■□□ 2.24
SSU72-201ENST00000291386 C2CD2LO14523 706 aa29.02■■■□□ 2.24
SSU72-201ENST00000291386 IKBKBO14920 756 aa29.02■■■□□ 2.24
SSU72-201ENST00000291386 SPTLC1O15269 473 aa29.02■■■□□ 2.24
SSU72-201ENST00000291386 POLR2BP30876 1174 aaKnown RBP29.02■■■□□ 2.24
SSU72-201ENST00000291386 MRPL58Q14197 206 aaKnown RBP29.02■■■□□ 2.24
SSU72-201ENST00000291386 TMEM184AQ6ZMB5 413 aa29.02■■■□□ 2.24
SSU72-201ENST00000291386 TRAPPC11Q7Z392 1133 aa29.02■■■□□ 2.24
SSU72-201ENST00000291386 PPFIBP1Q86W92 1011 aa29.02■■■□□ 2.24
SSU72-201ENST00000291386 APPL2Q8NEU8 664 aa29.02■■■□□ 2.24
SSU72-201ENST00000291386 CEP63Q96MT8 703 aa29.02■■■□□ 2.24
SSU72-201ENST00000291386 DUSP9Q99956 384 aaKnown RBP29.02■■■□□ 2.24
SSU72-201ENST00000291386 IGFLR1Q9H665 355 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms