RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 A0A087X0B3 334 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 ARHGEF37A1IGU5 675 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 H0YCG3 227 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 PPEF2O14830 753 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 HNRNPDLO14979 420 aaKnown RBP10.39□□□□□ -0.75
HMHB1-201ENST00000289448 SYN3O14994 580 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 GALR2O43603 387 aaPredicted RBP10.39□□□□□ -0.75
HMHB1-201ENST00000289448 XYLBO75191 536 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 KRT18P05783 430 aaKnown RBP10.39□□□□□ -0.75
HMHB1-201ENST00000289448 ADRB2P07550 413 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 POU2F2P09086 479 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 LRPAP1P30533 357 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 MCM4P33991 863 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 CLCN5P51795 746 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 ARPP19P56211 112 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 GTF2BQ00403 316 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 SLC5A9Q2M3M2 681 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 DYMQ7RTS9 669 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 MAP4K3Q8IVH8 894 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 ZNF461Q8TAF7 563 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 GPR152Q8TDT2 470 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 DDX12PQ92771 950 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 NXPE3Q969Y0 559 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 INTS4Q96HW7 963 aaKnown RBP10.39□□□□□ -0.75
HMHB1-201ENST00000289448 USP28Q96RU2 1077 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 MFSD1Q9H3U5 465 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 WNT16Q9UBV4 365 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 FBXL21Q9UKT6 434 aa10.39□□□□□ -0.75
HMHB1-201ENST00000289448 TIMM13Q9Y5L4 95 aaPredicted RBP10.39□□□□□ -0.75
HMHB1-201ENST00000289448 MYMKA6NI61 221 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 M0QZQ0 153 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 OGTO15294 1046 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 TBCAO75347 108 aaKnown RBP10.38□□□□□ -0.75
HMHB1-201ENST00000289448 VNN2O95498 520 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 RHOP08100 348 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 SRFP11831 508 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 ATF2P15336 505 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 AOC1P19801 751 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 AARSP49588 968 aaKnown RBP eCLIP10.38□□□□□ -0.75
HMHB1-201ENST00000289448 NUBP1P53384 320 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 GPC5P78333 572 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 CTXN3Q4LDR2 81 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 PABPC1LQ4VXU2 614 aaKnown RBP10.38□□□□□ -0.75
HMHB1-201ENST00000289448 JADE1Q6IE81 842 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 ZNF720Q7Z2F6 126 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 SFR1Q86XK3 245 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 NPAS3Q8IXF0 933 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 TCEAL8Q8IYN2 117 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 ING5Q8WYH8 240 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 DNAJC19Q96DA6 116 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 IPO9Q96P70 1041 aaKnown RBP10.38□□□□□ -0.75
HMHB1-201ENST00000289448 MSTO1Q9BUK6 570 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 STRA6Q9BX79 667 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 CPSF3Q9UKF6 684 aaKnown RBP10.38□□□□□ -0.75
HMHB1-201ENST00000289448 CA14Q9ULX7 337 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 PCDHB8Q9UN66 801 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 STYXL1Q9Y6J8 313 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 ZFP37Q9Y6Q3 630 aaPredicted RBP10.38□□□□□ -0.75
HMHB1-201ENST00000289448 F5P12259 2224 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 GPR179Q6PRD1 2367 aa10.38□□□□□ -0.75
HMHB1-201ENST00000289448 H7C4K7 107 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 K7ELQ4 463 aaPredicted RBP10.37□□□□□ -0.75
HMHB1-201ENST00000289448 SPTLC1O15269 473 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 PPP1R37O75864 691 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 OAZ2O95190 189 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 NFICP08651 508 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 OR4Q2P0C623 313 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 CYP3A5P20815 502 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 SCP2P22307 547 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 ADSSP30520 456 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 ACOT2P49753 483 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 PPP2R3AQ06190 1150 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 KCNA1Q09470 495 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 SLC39A14Q15043 492 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 SPATA1Q5VX52 437 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 RRAGBQ5VZM2 374 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 CRELD2Q6UXH1 353 aaPredicted RBP10.37□□□□□ -0.75
HMHB1-201ENST00000289448 RNF19BQ6ZMZ0 732 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 RTL10Q7L3V2 364 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 KRI1Q8N9T8 703 aaKnown RBP10.37□□□□□ -0.75
HMHB1-201ENST00000289448 APPL2Q8NEU8 664 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 ATOH1Q92858 354 aaPredicted RBP10.37□□□□□ -0.75
HMHB1-201ENST00000289448 TCEAL4Q96EI5 215 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 FAM212AQ96EL1 285 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 FGFBP2Q9BYJ0 223 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 PANK2Q9BZ23 570 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 CRISPLD1Q9H336 500 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 ST6GALNAC4Q9H4F1 302 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 RPF1Q9H9Y2 349 aaKnown RBP10.37□□□□□ -0.75
HMHB1-201ENST00000289448 CYP4F11Q9HBI6 524 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 SLC2A4RGQ9NR83 387 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 STK17AQ9UEE5 414 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 KCNH3Q9ULD8 1083 aa10.37□□□□□ -0.75
HMHB1-201ENST00000289448 UBQLN1Q9UMX0 589 aaKnown RBP10.37□□□□□ -0.75
HMHB1-201ENST00000289448 PDCD11Q14690 1871 aaKnown RBP10.36□□□□□ -0.75
HMHB1-201ENST00000289448 PRRG1O14668 218 aa10.36□□□□□ -0.75
HMHB1-201ENST00000289448 STX6O43752 255 aa10.36□□□□□ -0.75
HMHB1-201ENST00000289448 CEBPBP17676 345 aa10.36□□□□□ -0.75
HMHB1-201ENST00000289448 ELF1P32519 619 aa10.36□□□□□ -0.75
HMHB1-201ENST00000289448 CCR2P41597 374 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms