RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 TAF4BQ92750 862 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 TATDN2Q93075 761 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 HTATIP2Q9BUP3 242 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 STK33Q9BYT3 514 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 AJAP1Q9UKB5 411 aaPredicted RBP20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 R3HCC1Q9Y3T6 440 aaKnown RBP20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 PCDHB7Q9Y5E2 793 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 TRIP11Q15643 1979 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 ATICP31939 592 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 SCNN1GP51170 649 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 GCNT1Q02742 428 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 SPOPLQ6IQ16 392 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 GLB1LQ6UWU2 654 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 CRIPAKQ8N1N5 446 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 PPM1KQ8N3J5 372 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 ELMO3Q96BJ8 720 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 FAM81BQ96LP2 452 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 NUCKS1Q9H1E3 243 aaKnown RBP20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 APOBEC3GQ9HC16 384 aaKnown RBP20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 RNF216Q9NWF9 866 aaPredicted RBP20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 MYO6Q9UM54 1294 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 AGAP1Q9UPQ3 857 aa20.34■□□□□ 0.85
PDLIM3-202ENST00000284770 LRRC53A6NM62 1247 aa20.33■□□□□ 0.84
PDLIM3-202ENST00000284770 KCNJ6P48051 423 aa20.33■□□□□ 0.84
PDLIM3-202ENST00000284770 JAM2P57087 298 aa20.33■□□□□ 0.84
PDLIM3-202ENST00000284770 SOX4Q06945 474 aaPredicted RBP20.33■□□□□ 0.84
PDLIM3-202ENST00000284770 RAPGEF1Q13905 1077 aa20.33■□□□□ 0.84
PDLIM3-202ENST00000284770 NAB2Q15742 525 aa20.33■□□□□ 0.84
PDLIM3-202ENST00000284770 ZNF699Q32M78 642 aa20.33■□□□□ 0.84
PDLIM3-202ENST00000284770 PDXDC1Q6P996 788 aa20.33■□□□□ 0.84
PDLIM3-202ENST00000284770 C7orf61Q8IZ16 206 aa20.33■□□□□ 0.84
PDLIM3-202ENST00000284770 SPAG5Q96R06 1193 aa20.33■□□□□ 0.84
PDLIM3-202ENST00000284770 VRTNQ9H8Y1 702 aa20.33■□□□□ 0.84
PDLIM3-202ENST00000284770 NUB1Q9Y5A7 615 aa20.33■□□□□ 0.84
PDLIM3-202ENST00000284770 ABHD14A-ACY1A0A1B0GW23 586 aa20.32■□□□□ 0.84
PDLIM3-202ENST00000284770 ANO9A1A5B4 782 aa20.32■□□□□ 0.84
PDLIM3-202ENST00000284770 ARHGAP6O43182 974 aa20.32■□□□□ 0.84
PDLIM3-202ENST00000284770 ZNF500O60304 480 aaPredicted RBP20.32■□□□□ 0.84
PDLIM3-202ENST00000284770 MFAP3P55082 362 aa20.32■□□□□ 0.84
PDLIM3-202ENST00000284770 TSR1Q2NL82 804 aaKnown RBP20.32■□□□□ 0.84
PDLIM3-202ENST00000284770 CLLU1OSQ5K130 101 aa20.32■□□□□ 0.84
PDLIM3-202ENST00000284770 C9orf57Q5W0N0 161 aa20.32■□□□□ 0.84
PDLIM3-202ENST00000284770 ENOSF1Q7L5Y1 443 aa20.32■□□□□ 0.84
PDLIM3-202ENST00000284770 HPDLQ96IR7 371 aa20.32■□□□□ 0.84
PDLIM3-202ENST00000284770 KREMEN1Q96MU8 473 aa20.32■□□□□ 0.84
PDLIM3-202ENST00000284770 LRFN2Q9ULH4 789 aa20.32■□□□□ 0.84
PDLIM3-202ENST00000284770 ALPK3Q96L96 1907 aa20.32■□□□□ 0.84
PDLIM3-202ENST00000284770 PDCD11Q14690 1871 aaKnown RBP20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 PIRO00625 290 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 CLSTN1O94985 981 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 STAU1O95793 577 aaKnown RBP20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 POMCP01189 267 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 FGFR1P11362 822 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 LRPAP1P30533 357 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 HNRNPH3P31942 346 aaKnown RBP20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 GRIK3Q13003 919 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 DRAP1Q14919 205 aaPredicted RBP20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 MEA1Q16626 185 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 WDR59Q6PJI9 974 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 C17orf53Q8N3J3 647 aaPredicted RBP20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 SYN2Q92777 582 aaPredicted RBP20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 KAT5Q92993 513 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 GOLGA2P5Q9HBQ8 144 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 IL23AQ9NPF7 189 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 INPP5FQ9Y2H2 1132 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 MYO1EQ12965 1108 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 ARHGAP44Q17R89 818 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 NPAS4Q8IUM7 802 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 LRRC52Q8N7C0 313 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 BADQ92934 168 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 FAXDC2Q96IV6 333 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 GPR88Q9GZN0 384 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 AIPL1Q9NZN9 384 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 KANSL3Q9P2N6 904 aa20.31■□□□□ 0.84
PDLIM3-202ENST00000284770 CCDC85CA6NKD9 419 aa20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 F8VZ95 297 aa20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 HOXA2O43364 376 aa20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 EVI5O60447 810 aa20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 EFCAB14O75071 495 aa20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 ACRP10323 421 aa20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 TBXAS1P24557 533 aaPredicted RBP20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 PPIGQ13427 754 aaKnown RBP eCLIP20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 CUL2Q13617 745 aa20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 WDR72Q3MJ13 1102 aa20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 ZNF667Q5HYK9 610 aa20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 NOMO2Q5JPE7 1267 aa20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 SFMBT2Q5VUG0 894 aa20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 URGCPQ8TCY9 931 aa20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 JAKMIP2Q96AA8 810 aa20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 NIF3L1Q9GZT8 377 aa20.3■□□□□ 0.84
PDLIM3-202ENST00000284770 PPEF2O14830 753 aa20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 STAT1P42224 750 aa20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 E4F1Q66K89 784 aaPredicted RBP20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 TMTC1Q8IUR5 882 aa20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 RRAGDQ9NQL2 400 aaPredicted RBP20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 KCND1Q9NSA2 647 aa20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 ZNHIT6Q9NWK9 470 aaKnown RBP20.29■□□□□ 0.84
PDLIM3-202ENST00000284770 PCDH10Q9P2E7 1040 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms