RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 NOA1Q8NC60 698 aaKnown RBP11.77□□□□□ -0.52
GGPS1-201ENST00000282841 SLC35G2Q8TBE7 412 aa11.77□□□□□ -0.52
GGPS1-201ENST00000282841 RAET1EQ8TD07 263 aa11.77□□□□□ -0.52
GGPS1-201ENST00000282841 GOLGA2P5Q9HBQ8 144 aa11.77□□□□□ -0.52
GGPS1-201ENST00000282841 TRMT13Q9NUP7 481 aaKnown RBP11.77□□□□□ -0.52
GGPS1-201ENST00000282841 SAR1BQ9Y6B6 198 aa11.77□□□□□ -0.52
GGPS1-201ENST00000282841 PJA2O43164 708 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 SEPT4O43236 478 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 CLTAP09496 248 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 RHOXF2BP0C7M4 288 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 DARSP14868 501 aaKnown RBP11.77□□□□□ -0.53
GGPS1-201ENST00000282841 ACO1P21399 889 aaKnown RBP11.77□□□□□ -0.53
GGPS1-201ENST00000282841 ABCD1P33897 745 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 GTF2F1P35269 517 aaKnown RBP eCLIP11.77□□□□□ -0.532e-6■■■■□ 26
GGPS1-201ENST00000282841 ZNF699Q32M78 642 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 WDR49Q8IV35 697 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 SH3TC2Q8TF17 1288 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 RHOXF2Q9BQY4 288 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 TLR10Q9BXR5 811 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 TSGA10Q9BZW7 698 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 TRIM7Q9C029 511 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 TRIM6Q9C030 488 aaPredicted RBP11.77□□□□□ -0.53
GGPS1-201ENST00000282841 HMGXB4Q9UGU5 601 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 POLR2BP30876 1174 aaKnown RBP11.77□□□□□ -0.53
GGPS1-201ENST00000282841 PDE6CP51160 858 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 AFF1P51825 1210 aaKnown RBP11.77□□□□□ -0.53
GGPS1-201ENST00000282841 CYFIP2Q96F07 1278 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 KIF12Q96FN5 646 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 HHIPL1Q96JK4 782 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 ACAP3Q96P50 834 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 SMYD3Q9H7B4 428 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 NOC2LQ9Y3T9 749 aaKnown RBP11.77□□□□□ -0.53
GGPS1-201ENST00000282841 GRIN2DO15399 1336 aa11.77□□□□□ -0.53
GGPS1-201ENST00000282841 ZNF236Q9UL36 1845 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 GJA9P57773 515 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 NAA35Q5VZE5 725 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 RBBP8NLQ8NC74 664 aaPredicted RBP11.76□□□□□ -0.53
GGPS1-201ENST00000282841 TRIM58Q8NG06 486 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 CAGE1Q8TC20 777 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 ZNF296Q8WUU4 475 aaPredicted RBP11.76□□□□□ -0.53
GGPS1-201ENST00000282841 DDX1Q92499 740 aaKnown RBP11.76□□□□□ -0.53
GGPS1-201ENST00000282841 TUBGCP4Q9UGJ1 667 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 PARP2Q9UGN5 583 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 SRRDQ9UH36 339 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 NENFQ9UMX5 172 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 AGAP1Q9UPQ3 857 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 SMIM35A0A1B0GVV1 85 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 HCRTO43612 131 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 ADAMTS4O75173 837 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 TADA3O75528 432 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 ZMYND10O75800 440 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 ASS1P00966 412 aaKnown RBP11.76□□□□□ -0.53
GGPS1-201ENST00000282841 TNNC2P02585 160 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 DAAM2Q86T65 1068 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 RNF169Q8NCN4 708 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 ERO1AQ96HE7 468 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 ANKRD36BP1Q96IX9 119 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 ALS2CR12Q96Q35 445 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 LPIN3Q9BQK8 851 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 ZSWIM1Q9BR11 485 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 ADPGKQ9BRR6 497 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 NFKBIZQ9BYH8 718 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 IMPG2Q9BZV3 1241 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 XYLT2Q9H1B5 865 aa11.76□□□□□ -0.53
GGPS1-201ENST00000282841 RANBP2P49792 3224 aaKnown RBP11.75□□□□□ -0.53
GGPS1-201ENST00000282841 KIAA0391O15091 583 aaKnown RBP11.75□□□□□ -0.53
GGPS1-201ENST00000282841 PMM2O15305 246 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 THAP12O43422 761 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 BUB1BO60566 1050 aaPredicted RBP11.75□□□□□ -0.53
GGPS1-201ENST00000282841 MCF2P10911 925 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 GCNT1Q02742 428 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 C2orf54Q08AI8 447 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 CTNNBL1Q8WYA6 563 aaPredicted RBP11.75□□□□□ -0.53
GGPS1-201ENST00000282841 UBXN4Q92575 508 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 LPPQ93052 612 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 ZFP42Q96MM3 310 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 MTG1Q9BT17 334 aaPredicted RBP11.75□□□□□ -0.53
GGPS1-201ENST00000282841 SDCBP2Q9H190 292 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 SPC25Q9HBM1 224 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 CISHQ9NSE2 258 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 CTTNBP2NLQ9P2B4 639 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 CDY2AQ9Y6F7 541 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 TUBB4AP04350 444 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 GNA15P30679 374 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 THPOP40225 353 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 FAM187BQ17R55 369 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 TWF2Q6IBS0 349 aaKnown RBP11.75□□□□□ -0.53
GGPS1-201ENST00000282841 ZNF410Q86VK4 478 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 ARRDC4Q8NCT1 418 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 TWNKQ96RR1 684 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 LUC7LQ9NQ29 371 aaKnown RBP11.75□□□□□ -0.53
GGPS1-201ENST00000282841 JRKLQ9Y4A0 524 aa11.75□□□□□ -0.53
GGPS1-201ENST00000282841 PIK3R2O00459 728 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 RECQL4O94761 1208 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 CCDC172P0C7W6 258 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 CDR2Q01850 454 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 TMEM132DQ14C87 1099 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 AADACL2Q6P093 401 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 SRGAP1Q7Z6B7 1085 aa11.74□□□□□ -0.53
GGPS1-201ENST00000282841 ADAT2Q7Z6V5 191 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms