RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 PADI6Q6TGC4 694 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 THNSL1Q8IYQ7 743 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 RNASE11Q8TAA1 199 aaKnown RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 GLMNQ92990 594 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 FAR2Q96K12 515 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 ZNF341Q9BYN7 854 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 SPATA2Q9UM82 520 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 ABCC10Q5T3U5 1492 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 CAND2O75155 1236 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 S100A9P06702 114 aaKnown RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 ALDH6A1Q02252 535 aaKnown RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 RFFLQ8WZ73 363 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 JADE3Q92613 823 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 TSC22D2O75157 780 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 EIF3EP60228 445 aaKnown RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 ARHGEF7Q14155 803 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 OOSP2Q86WS3 158 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 ZNF513Q8N8E2 541 aaPredicted RBP9.14□□□□□ -0.95
NIPBL-201ENST00000282516 PI4KBQ9UBF8 816 aa9.14□□□□□ -0.95
NIPBL-201ENST00000282516 CENPXA8MT69 81 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 ASNA1O43681 348 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 DYRK3O43781 588 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 FEN1P39748 380 aaKnown RBP9.13□□□□□ -0.95
NIPBL-201ENST00000282516 CCT8P50990 548 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 PEX3P56589 373 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 RCOR2Q8IZ40 523 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 CLMNQ96JQ2 1002 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 SYNMO15061 1565 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 KCNN4O15554 427 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 KRT6AP02538 564 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 HOXA13P31271 388 aaPredicted RBP9.13□□□□□ -0.95
NIPBL-201ENST00000282516 GCLMP48507 274 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 PTK6Q13882 451 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 FAM98CQ17RN3 349 aaKnown RBP9.13□□□□□ -0.95
NIPBL-201ENST00000282516 ATAD3BQ5T9A4 648 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 LCORLQ8N3X6 602 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 VMP1Q96GC9 406 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 ENO4A6NNW6 628 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 A1BGP04217 495 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 CAPN1P07384 714 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 SNX17Q15036 470 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 KRT73Q86Y46 540 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 DNAJC10Q8IXB1 793 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 CYP4Z2PQ8N1L4 340 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 CCDC24Q8N4L8 307 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 LINC00301Q8NCQ3 95 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 UBA2Q9UBT2 640 aaPredicted RBP9.13□□□□□ -0.95
NIPBL-201ENST00000282516 RWDD3Q9Y3V2 267 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 AIM2O14862 343 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 CDH16O75309 829 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 CYP51A1Q16850 503 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 RNF25Q96BH1 459 aaPredicted RBP9.13□□□□□ -0.95
NIPBL-201ENST00000282516 SGSM3Q96HU1 749 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 MAML3Q96JK9 1138 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 TNIP3Q96KP6 325 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 SMAD5Q99717 465 aaKnown RBP9.13□□□□□ -0.95
NIPBL-201ENST00000282516 F8W810 466 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 FCGR1AP12314 374 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 HIST2H2ACQ16777 129 aaPredicted RBP9.13□□□□□ -0.95
NIPBL-201ENST00000282516 LRRC36Q1X8D7 754 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 HIST2H2AA3Q6FI13 130 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 EEPD1Q7L9B9 569 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 PRPF39Q86UA1 669 aaKnown RBP9.13□□□□□ -0.95
NIPBL-201ENST00000282516 TMCC3Q9ULS5 477 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 ARIH1Q9Y4X5 557 aaPredicted RBP9.13□□□□□ -0.95
NIPBL-201ENST00000282516 GPATCH8Q9UKJ3 1502 aaKnown RBP9.13□□□□□ -0.95
NIPBL-201ENST00000282516 TRAPPC3O43617 180 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 SRGAP2O75044 1071 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 COASYQ13057 564 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 DOK7Q18PE1 504 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 ARMC4Q5T2S8 1044 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 RIN3Q8TB24 985 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 HIC2Q96JB3 615 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 KLHL20Q9Y2M5 609 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 FHOD1Q9Y613 1164 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 BIVM-ERCC5R4GMW8 1640 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 IFNA14P01570 189 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 EIF2AK2P19525 551 aaKnown RBP9.13□□□□□ -0.95
NIPBL-201ENST00000282516 SLC16A2P36021 539 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 PDE4DIPQ5VU43 2346 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 TBC1D22BQ9NU19 505 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 ENOPH1Q9UHY7 261 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 NBPF26B4DH59 902 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 SMAPO00193 183 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 BTKQ06187 659 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 EDRF1Q3B7T1 1238 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 NBPF15Q8N660 670 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 RMND5BQ96G75 393 aaPredicted RBP9.13□□□□□ -0.95
NIPBL-201ENST00000282516 ZNF302Q9NR11 478 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 PCMTD2Q9NV79 361 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 SHROOM2Q13796 1616 aa9.13□□□□□ -0.95
NIPBL-201ENST00000282516 ASMTLO95671 621 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 CHI3L1P36222 383 aaPredicted RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 COPAP53621 1224 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 YWHAZP63104 245 aaKnown RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 TMED8Q6PL24 325 aaPredicted RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 IFNEQ86WN2 208 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 GSPT2Q8IYD1 628 aaKnown RBP9.12□□□□□ -0.95
NIPBL-201ENST00000282516 SHCBP1Q8NEM2 672 aa9.12□□□□□ -0.95
NIPBL-201ENST00000282516 ATL2Q8NHH9 583 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms