RNA–Protein interactions for RNA: ENST00000282223.11

SPOCK1-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5 BASIC

Gene SPOCK1, Length 4,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-201ENST00000282223 ZMPSTE24O75844 475 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 FTLP02792 175 aaPredicted RBP8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 MAP4P27816 1152 aaKnown RBP8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 LDLRAP1Q5SW96 308 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 FAM111AQ96PZ2 611 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 STRBPQ96SI9 672 aaKnown RBP8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 THAP2Q9H0W7 228 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 MANSC1Q9H8J5 431 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 PLGRKTQ9HBL7 147 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 HACD3Q9P035 362 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 SATB2Q9UPW6 733 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 MYMKA6NI61 221 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 NOTOA8MTQ0 251 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 USP17L12C9JPN9 530 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 USP17L21D6R901 530 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 EIF3FO00303 357 aaPredicted RBP8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 UQCRBP14927 111 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 CCNG1P51959 295 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 ADAM17P78536 824 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 FAM69CQ0P6D2 419 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 RASGRF1Q13972 1273 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 SLC1A5Q15758 541 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 SFT2D3Q587I9 215 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 HGSNATQ68CP4 663 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 ALYREFQ86V81 257 aaKnown RBP8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 GPBP1Q86WP2 473 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 KIAA0895Q8NCT3 520 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 ALG3Q92685 438 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 EME1Q96AY2 570 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 COX4I2Q96KJ9 171 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 ZSCAN10Q96SZ4 725 aaPredicted RBP8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 SENP7Q9BQF6 1050 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 APOL6Q9BWW8 343 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 TRIM39Q9HCM9 518 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 SUN2Q9UH99 717 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 HERC5Q9UII4 1024 aaKnown RBP8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 CNOT7Q9UIV1 285 aaKnown RBP8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 TMED5Q9Y3A6 229 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 OVOS2A0A0G2JMS6 1433 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 RPTORQ8N122 1335 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 A6NL46 340 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 KLRF2D3W0D1 207 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 TBCAO75347 108 aaKnown RBP8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 DGKIO75912 1065 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 GCNT3O95395 438 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 PORP16435 677 aaPredicted RBP8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 ATF3P18847 181 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 COMTP21964 271 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 COILP38432 576 aaPredicted RBP8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 HDAC4P56524 1084 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 RELAQ04206 551 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 KLRC3Q07444 240 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 CALCRLQ16602 461 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 TRMT5Q32P41 509 aaKnown RBP8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 SLC45A4Q5BKX6 768 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 DPY19L2Q6NUT2 758 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 ZNF572Q7Z3I7 529 aaPredicted RBP8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 LCORLQ8N3X6 602 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 RBM15BQ8NDT2 890 aaKnown RBP8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 ZFP28Q8NHY6 868 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 RFFLQ8WZ73 363 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 PRR11Q96HE9 360 aaPredicted RBP8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 NMUR2Q9GZQ4 415 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 C6orf50Q9HD87 102 aa8.19□□□□□ -1.1
SPOCK1-201ENST00000282223 SYNGAP1Q96PV0 1343 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 A0A1W2PPM1 405 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 PABPC4LP0CB38 370 aaKnown RBP8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 BGNP21810 368 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 NONOQ15233 471 aaKnown RBP eCLIP8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 CCDC153Q494R4 210 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 TBC1D10BQ4KMP7 808 aaPredicted RBP8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 TMEM63BQ5T3F8 832 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 ZNF790Q6PG37 636 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 SLC15A3Q8IY34 581 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 EXOC8Q8IYI6 725 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 FAM186BQ8IYM0 893 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 ENDOVQ8N8Q3 282 aaKnown RBP8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 USP33Q8TEY7 942 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 PPP4R1Q8TF05 950 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 SH3GL1Q99961 368 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 EMILIN3Q9NT22 766 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 IQGAP1P46940 1657 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 PPRC1Q5VV67 1664 aaKnown RBP8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 MYH15Q9Y2K3 1946 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 TCRBV7S2A1N4TA0A589 114 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 AIM2O14862 343 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 LPXNO60711 386 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 EDF1O60869 148 aaKnown RBP8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 MFN2O95140 757 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 ESRRBO95718 433 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 PCCAP05165 728 aaPredicted RBP8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 CAPN1P07384 714 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 T-ENOLP0DO92 83 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 MAGP20916 626 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 MAGEA4P43358 317 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 LRRC63Q05C16 580 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 PDIA2Q13087 525 aaKnown RBP8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 NR1H3Q13133 447 aa8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 PDAP1Q13442 181 aaKnown RBP8.18□□□□□ -1.1
SPOCK1-201ENST00000282223 RARS2Q5T160 578 aaKnown RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms