RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 LRRC31Q6UY01 552 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 DNAAF3Q8N9W5 541 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 TRAPPC12Q8WVT3 735 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 HSD17B14Q9BPX1 270 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 TRIM17Q9Y577 477 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 ANKRD63C9JTQ0 380 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 CLCN3P51790 818 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 GTF2A2P52657 109 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 CLNS1AP54105 237 aaKnown RBP15.18■□□□□ 0.02
TMEM47-201ENST00000275954 DEFB115Q30KQ5 88 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 P3H1Q32P28 736 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 C1orf131Q8NDD1 294 aaKnown RBP15.18■□□□□ 0.02
TMEM47-201ENST00000275954 PRPF31Q8WWY3 499 aaKnown RBP15.18■□□□□ 0.02
TMEM47-201ENST00000275954 KIF12Q96FN5 646 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 SNF8Q96H20 258 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 ZSWIM1Q9BR11 485 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 DCTN4Q9UJW0 460 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 GTF3C4Q9UKN8 822 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 CHN1P15882 459 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 FBXW10Q5XX13 1052 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 TRIM68Q6AZZ1 485 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 ATP8B4Q8TF62 1192 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 ATP2A3Q93084 1043 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 WNK4Q96J92 1243 aa15.18■□□□□ 0.02
TMEM47-201ENST00000275954 RBM15Q96T37 977 aaKnown RBP eCLIP15.18■□□□□ 0.02
TMEM47-201ENST00000275954 FRMD3A2A2Y4 597 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 TGFB1I1O43294 461 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 STAMBPO95630 424 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 PTGER2P43116 358 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 MAPK7Q13164 816 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 EPM2AIP1Q7L775 607 aaPredicted RBP15.17■□□□□ 0.02
TMEM47-201ENST00000275954 KRT35Q92764 455 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 CHMP6Q96FZ7 201 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 PRMT1Q99873 361 aaKnown RBP15.17■□□□□ 0.02
TMEM47-201ENST00000275954 TIPINQ9BVW5 301 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 MTMR12Q9C0I1 747 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 SMYD2Q9NRG4 433 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 SNX9Q9Y5X1 595 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 OATP04181 439 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 ADORA2BP29275 332 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 ARL4AP40617 200 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 CDR2Q01850 454 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 KCNT1Q5JUK3 1230 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 PCNX4Q63HM2 1172 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 PHLDB3Q6NSJ2 640 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 ZNF473Q8WTR7 871 aaKnown RBP15.17■□□□□ 0.02
TMEM47-201ENST00000275954 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.17■□□□□ 0.02
TMEM47-201ENST00000275954 KDM3BQ7LBC6 1761 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 EXTL3O43909 919 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 GJB6O95452 261 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 EFNA5P52803 228 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 CHADLQ6NUI6 762 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 SDCCAG8Q86SQ7 713 aaPredicted RBP15.17■□□□□ 0.02
TMEM47-201ENST00000275954 C4orf19Q8IY42 314 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 NACA2Q9H009 215 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 GOLGA4Q13439 2230 aaKnown RBP15.17■□□□□ 0.02
TMEM47-201ENST00000275954 MAP2K7O14733 419 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 MAFGO15525 162 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 ACTN3Q08043 901 aaPredicted RBP15.17■□□□□ 0.02
TMEM47-201ENST00000275954 BYSLQ13895 437 aaKnown RBP15.17■□□□□ 0.02
TMEM47-201ENST00000275954 TWF2Q6IBS0 349 aaKnown RBP15.17■□□□□ 0.02
TMEM47-201ENST00000275954 EXOC8Q8IYI6 725 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 C4orf33Q8N1A6 199 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 PPM1NQ8N819 430 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 UBA3Q8TBC4 463 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 GPRASP2Q96D09 838 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 KLF6Q99612 283 aaPredicted RBP15.17■□□□□ 0.02
TMEM47-201ENST00000275954 FAM49BQ9NUQ9 324 aa15.17■□□□□ 0.02
TMEM47-201ENST00000275954 A0A0G2JND7 137 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 COILP38432 576 aaPredicted RBP15.16■□□□□ 0.02
TMEM47-201ENST00000275954 BEX3Q00994 111 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 ITKQ08881 620 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 LRRC15Q8TF66 581 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 EPN3Q9H201 632 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 GANQ9H2C0 597 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 A1CFQ9NQ94 594 aaKnown RBP15.16■□□□□ 0.02
TMEM47-201ENST00000275954 INTUQ9ULD6 942 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 TRPM3Q9HCF6 1732 aaPredicted RBP15.16■□□□□ 0.02
TMEM47-201ENST00000275954 MYH14Q7Z406 1995 aaKnown RBP15.16■□□□□ 0.02
TMEM47-201ENST00000275954 ARHGAP42A6NI28 874 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 USP2O75604 605 aaPredicted RBP15.16■□□□□ 0.02
TMEM47-201ENST00000275954 PDGFRBP09619 1106 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 ZNF286BP0CG31 522 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 ITGA8P53708 1063 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 FRMPD4Q14CM0 1322 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 SNCBQ16143 134 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 ACAD10Q6JQN1 1059 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 EFCAB12Q6NXP0 572 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 TATDN1Q6P1N9 297 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 TRIM72Q6ZMU5 477 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 HACE1Q8IYU2 909 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 PPFIBP2Q8ND30 876 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 C7orf43Q8WVR3 580 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 C2orf40Q9H1Z8 148 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 CICQ96RK0 1608 aaPredicted RBP15.16■□□□□ 0.02
TMEM47-201ENST00000275954 CYP3A7-CYP3A51PA0A087WV96 503 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 TCP11X1B4DZS4 312 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 P4HA2O15460 535 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 CYP3A7P24462 503 aa15.16■□□□□ 0.02
TMEM47-201ENST00000275954 SDC4P31431 198 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms